Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20arabiensis_20[genbank_20GCA_5F000349185.1_202013-04-02] 1,214 sequences; 246,567,867 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq358 127 2e-23 >seq358 Length=35138 Score = 127 bits (140), Expect = 2e-23 Identities = 133/172 (77%), Gaps = 2/172 (1%) Strand=Plus/Plus Query 870800 ATTGTCGATTATTCTTCTCCAAATATTGCTAAAGAAATGCATATTGGACATTTAAGATCA 870859 || ||||||| ||| || || || | || |||||||||||| | || |||||| | || Sbjct 1007 ATAGTCGATTTTTCCTCGCCTAACGTAGCGAAAGAAATGCATGTCGGTCATTTACGTTCG 1066 Query 870860 ACTATTATTGGTGAATCTATTTGTAGGGTATTAGAA-ATGTGTGGACACGATGTTTATCG 870918 || || |||||||| || |||||| | | || ||| || | ||||||||||| ||| Sbjct 1067 ACCATCATTGGTGATTCAATTTGTCGATTTTTGGAATATCT-CGGACACGATGTGCTTCG 1125 Query 870919 TATTAATCATGTGGGTGATTGGGGAACTCAATTCGGTATGTTAATTGCTTAT 870970 |||||| ||| | || || |||||||| ||||| ||||||||||||||| || Sbjct 1126 TATTAACCATATCGGAGACTGGGGAACGCAATTTGGTATGTTAATTGCTCAT 1177 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780762157321084