Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20arabiensis_20[genbank_20GCA_5F000349185.1_202013-04-02] 1,214 sequences; 246,567,867 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq472 125 8e-24 >seq472 Length=2253382 Score = 125 bits (138), Expect = 8e-24 Identities = 293/440 (67%), Gaps = 9/440 (2%) Strand=Plus/Plus Query 106169 GCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTC 106228 ||||| ||||||||||| ||||| | ||| || |||||||| || || | ||| Sbjct 818269 GCCAACTCACAGCTCGCTTCCAGCGCGCCGTAGTAGATGGTTTCGAATATTTGTTGATTT 818328 Query 106229 ATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGA 106288 | || | || || || || | | ||||| || || || |||| || | Sbjct 818329 AGCTTTTGAGCCTCTTCGCTTTCGTACGGATAGCGCATCAGGATGAACGCATCGGCCATG 818388 Query 106289 CCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA--- 106345 || || || || | || || || ||||| |||||||| || ||| || ||| Sbjct 818389 CCCTGCACGCCGATCCCGATCGGCCTGTGGCGCATATTGGAG---CGCTTAGCCTCCGGC 818445 Query 106346 ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATT 106405 |||||||| |||| ||||||| | ||| ||||| || || |||| | || | Sbjct 818446 ACGGGATAGTAATTGACATCAATGATTTTGTTCAGATTGCGCGTTACGGTCTTAGCGACT 818505 Query 106406 TCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCG 106465 || | || ||| || | ||| | || | |||| || ||| || | | |||| Sbjct 818506 TCCTTCAGCTTTGCAAAGTCATACGTTT---TGTCTTGCTTTACAAACATGTTCAAGGCG 818562 Query 106466 ATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTA 106525 || || |||| |||||| || || ||||||||| | |||||| | ||| || || Sbjct 818563 ATCGAGGCCAGATTGCATACCGCTACCTCATCCTTCGACGAGTACTCCACAATCTCAGTG 818622 Query 106526 CACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCA 106585 ||||||||||||| || || || || | ||||| |||||||| || ||||| ||| Sbjct 818623 CACAAGTTGGAACATTTGATGGTGCCGATATTCTGCTGGTTACTTTTACGATTGCAAGCA 818682 Query 106586 TCCTTGTAGAGCATGTAGGG 106605 |||||||| |||||||| || Sbjct 818683 TCCTTGTACAGCATGTACGG 818702 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589971847041360