Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20arabiensis_20[genbank_20GCA_5F000349185.1_202013-04-02] 1,214 sequences; 246,567,867 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq250 147 5e-30 seq327 113 1e-19 >seq250 Length=5469655 Score = 147 bits (162), Expect = 5e-30 Identities = 164/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 194922 GAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCT 194981 ||||| || || || ||||| || || || || ||||| ||||| |||| ||||| | Sbjct 4640802 GAGTCGCAGCACCAGATGAAGGGTCGATTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCG 4640861 Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTC 195041 ||||| || |||||||| || |||||||| || || || || ||||| ||||||||||| Sbjct 4640862 ACCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGAATGCCTTC 4640921 Query 195042 TTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGT 195101 ||||| || || ||| ||| || ||||| || ||||||||| || || ||||| || Sbjct 4640922 CTTGTCCTGGATCTTTGCCTTCACATTCTCGATCGTGTCCGAAGGCTCGACCTCAAGTGT 4640981 Query 195102 AACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | ||||| || || | ||||| ||||| | ||||| Sbjct 4640982 GATGGTCTTGCCGGTGAGTGTTTTCACGAAAATCTGCAT 4641020 >seq327 Length=13998812 Score = 113 bits (124), Expect = 1e-19 Identities = 153/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTT 194989 ||| | |||||| | ||||| || || || ||||| |||| |||| || | || || | Sbjct 3501139 AACCAAGTGAAGGGGTGACTCCTTCTGGATGTTGTAGTCGGACAAG-GTACGTCCGTCCT 3501081 Query 194990 CGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTT 195049 | ||||||||||| |||||||| | || || || ||||||||||| || || || || | Sbjct 3501080 CCAGCTGCTTACCGGCGAAGATCAAACGCTGCTGATCTGGAGGAATACCCTCCTTATCCT 3501021 Query 195050 GAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCT 195109 | || || ||| |||||||| || |||||||| || || || || || | |||| Sbjct 3501020 GGATCTTGGCCTTCACGTTCTCGATCGTGTCCGACGGCTCGACCTCCAGCGTGATGGTCT 3500961 Query 195110 TTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | || |||| || || ||||| | ||||| Sbjct 3500960 TGCCAGTCAGCGTCTTCACGAAGATCTGCAT 3500930 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109464342707138