Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20arabiensis_20[genbank_20GCA_5F000349185.1_202013-04-02] 1,214 sequences; 246,567,867 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq328 93.3 6e-14 >seq328 Length=4755327 Score = 93.3 bits (102), Expect = 6e-14 Identities = 230/345 (67%), Gaps = 3/345 (1%) Strand=Plus/Minus Query 47963 AAGTT-TCACCACGTCTTGGAGATTCATGATTAAAAAGAATACCACTACAGGCATACATT 48021 ||||| || || || | || || || ||||| || || || || | ||||| |||| Sbjct 877721 AAGTTCTCCCCCCGGCGCGGCGACTCGTGATTGAACAGGATGCCGTTGCAGGCGAACATG 877662 Query 48022 CCGTATGATTCACGATAGTTCTTTACTATCCAGTACCCATAGAGTTTTGCAACAC-CATA 48080 |||| | ||| |||||||| | || ||||||||||| || | | ||| |||| | || Sbjct 877661 TCGTACGCTTCGCGATAGTTGATCACAATCCAGTACCCGTACA-TCTTGGCACACGCGTA 877603 Query 48081 AGGAGAACGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCTTACCATA 48140 || || || |||||||| || || | || |||| || ||||| |||||| || || Sbjct 877602 CGGCGAGCGGGGATAGAACGGGGTCTTTTCGTTCTGGGGCGTCTCCGCCACCTTGCCGTA 877543 Query 48141 AAGTTCACTGGTGGATGCTTGATAGATACGAACCCTATCTTCCATCTCAAGCAAACGGAC 48200 || || || ||||| || |||| || ||| | ||| | | | ||||| Sbjct 877542 CAGCTCGGACGTCGATGCCTGGTAGAAGCGGACCGTCCGCTCCTGTCCCACCGTACGGAT 877483 Query 48201 TGCCTCAAGCACTCTCAGGGTGCCTATGGCATCTGTCTGACCAGTATACTCGGGCATCTC 48260 || || |||| | ||| || || | || || || | || |||||| || || Sbjct 877482 GGCGTCGAGCAGCCGCAGCGTACCGACCGCGTCCACCTCCGCCGTGTACTCGCTCAGATC 877423 Query 48261 AAACGAAACCTTTACATGACTCTGTGCCCCAAGATTATAAATCTC 48305 ||||||| ||| || || ||||| || | ||||| || || || Sbjct 877422 GAACGAAATCTTCACGTGGCTCTGGGCGGCTAGATTGTATATTTC 877378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665484301122480