Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20arabiensis_20[genbank_20GCA_5F000349185.1_202013-04-02] 1,214 sequences; 246,567,867 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq472 116 4e-21 >seq472 Length=2253382 Score = 116 bits (128), Expect = 4e-21 Identities = 453/704 (64%), Gaps = 15/704 (2%) Strand=Plus/Minus Query 75891 TCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGA 75950 || |||| ||| ||| || || ||| || ||||| |||||||||||||| || | Sbjct 818728 TCGAATCGCAGGTGGAAACCGGCGTACCGTACATGCTGTACAAGGATGCTTGCAATCGTA 818669 Query 75951 AGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAG 76010 | |||||||| ||||| | || || ||||| | || || | ||||| || ||| | | Sbjct 818668 AAAGTAACCAGCAGAATATCGGCACCATCAAATGTTCCAACTTGTGCACTGAGATTGTGG 818609 Query 76011 AGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGT 76070 ||||| | ||||||||| || || |||||| |||| || |||||| | | || Sbjct 818608 AGTACTCGTCGAAGGATGAGGTAGCGGTATGCAATCTGGCCTCGATCGCCTTGAACATGT 818549 Query 76071 ATGTCAATGAAGAGACTCGCACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTG 76130 ||| || |||| | || | ||| | || ||| || | ||| || | |||| | Sbjct 818548 TTGTAAAGCAAGACA---AAACGTATGACTTTGCAAAGCTGAAGGAAGTCGCTAAGACCG 818492 Query 76131 TTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCCCGT---TGAGACTGCGC 76187 | || ||||| ||| | ||||||| |||| |||||||| ||| || || Sbjct 818491 TAACGCGCAATCTGAACAAAATCATTGATGTCAATTACTATCCCGTGCCGGAGGCTAAGC 818432 Query 76188 GAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTAT 76247 | || |||||||| ||||| || || || | || || || || | || |||| | Sbjct 818431 G---CTCCAATATGCGCCACAGGCCGATCGGGATCGGCGTGCAGGGCATGGCCGATGCGT 818375 Query 76248 TTATTTTGTGCCGCTACGCATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCT 76307 | || || ||||| | | || || || || | || | ||| | || | Sbjct 818374 TCATCCTGATGCGCTATCCGTACGAAAGCGAAGAGGCTCAAAAGCTAAATCAACAAATAT 818315 Query 76308 TTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTT 76367 | |||||||| || ||| | ||||| ||||| ||||| ||||| | | || Sbjct 818314 TCGAAACCATCTACTACGGCGCGCTGGAAGCGAGCTGTGAGTTGGCCGCTCGAGATGGAC 818255 Query 76368 CCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTT-CAGTTTGATATGTGG 76426 | || ||||| | ||||| ||| | | |||||| ||| |||| || |||| | Sbjct 818254 CGTACGAGACGTACGAGGGCAGTCCGGTG-AGCAAGGGCATCTTGCAGTACGAGATGT-G 818197 Query 76427 GAAGGTGAAACCAAGCTCAACTACG--ACTGGGATGTTCTCAAGGAACGCATCAAGGAGA 76484 ||| | |||| | | | || | |||||| | | |||||| ||| || Sbjct 818196 GAACAAGGAACCGA-CGGATCTGTGGAACTGGGCCGAGTTGAAGGAAAAGATCGCCAAGC 818138 Query 76485 AGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCT 76544 | || |||| || || || |||| || ||||| || || ||||| |||||||| Sbjct 818137 ACGGCATTCGCAATTCGCTGCTGTTGGCCCCGATGCCGACGGCTTCCACGGCACAAATTC 818078 Query 76545 TGGGTAATAATGAATGCTTTGAACCATACACAACAAACATCTAC 76588 | || || ||||||| || || || ||||| | ||| | ||| Sbjct 818077 TCGGCAACAATGAATCGTTCGAGCCGTACACGTCGAACGTTTAC 818034 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596560547056320