Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20arabiensis_20[genbank_20GCA_5F000349185.1_202013-04-02] 1,214 sequences; 246,567,867 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq1104 95.1 2e-14 >seq1104 Length=7559990 Score = 95.1 bits (104), Expect = 2e-14 Identities = 164/237 (69%), Gaps = 1/237 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 |||| || | ||||| | || || || |||||||| | || | || || || || Sbjct 5393662 AATTAATTT-CCACCACGCAGACGGAGAACCAGATGAAGAGTCGATTCCTTCTGGATGTT 5393720 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 |||||| || | || | ||| || | || ||||||||||| || | | ||| || Sbjct 5393721 ATAGTCCGACAGGGTGCGGCCATCCTCCAGCTGCTTTCCGGCAAAGATCAGACGCTGCTG 5393780 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||| || || ||||| || || || || || || | || | ||| ||| |||||||| Sbjct 5393781 ATCTGGCGGGATTCCCTCCTTGTCCTGGATCTTTGCCTTCACATTCTCAATCGTATCGGA 5393840 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || ||||||||| || || || || || || || || ||||| || || || ||||| Sbjct 5393841 AGGCTCAACTTCCAGGGTGATGGTCTTTCCGGTCAGAGTTTTCACGAAAATCTGCAT 5393897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899640747744480