Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20arabiensis_20[genbank_20GCA_5F000349185.1_202013-04-02] 1,214 sequences; 246,567,867 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq472 120 9e-22 seq461 116 1e-20 >seq472 Length=2253382 Score = 120 bits (132), Expect = 9e-22 Identities = 152/204 (75%), Gaps = 4/204 (2%) Strand=Plus/Plus Query 155545 CATAGTCAAATGTTTTATCCTCATTTACAAACATAC-CAAGACCAATAGACGCCAGATTA 155603 || ||||| | ||||| || | ||||||||||| |||| | | | || |||||||| Sbjct 818519 CAAAGTCATACGTTTTGTCTTGCTTTACAAACATGTTCAAGGCGA-TCGAGGCCAGATTG 818577 Query 155604 CATACCGCAGTCTCCTTGT-CGTCGCTGTATTCTACAATCTCACAGCACAGGTTAGAACT 155662 |||||||| ||| | | || || ||| || ||||||||| ||||| ||| |||| Sbjct 818578 CATACCGCTACCTCATCCTTCGACGA-GTACTCCACAATCTCAGTGCACAAGTTGGAACA 818636 Query 155663 CTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGCATCCTTGTATAGAAT 155722 ||||||||||| | ||||| ||||||| ||||| || |||||||||||||| || || Sbjct 818637 TTTGATGGTGCCGATATTCTGCTGGTTACTTTTACGATTGCAAGCATCCTTGTACAGCAT 818696 Query 155723 GTATGGGGTTCCTGTCTCCATCTG 155746 ||| || || || |||| ||| Sbjct 818697 GTACGGTACGCCGGTTTCCACCTG 818720 >seq461 Length=2121866 Score = 116 bits (128), Expect = 1e-20 Identities = 188/265 (71%), Gaps = 8/265 (3%) Strand=Plus/Plus Query 302575 TCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTA 302634 |||||| |||||| ||||||||||| || ||||| ||| | ||||| || || ||| Sbjct 1293968 TCCATAGCCTTGATCAAACGACGCTGGATGTAACCGGTTTCGGCCGTTTTGACGGCAGTA 1294027 Query 302635 TCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGT-AGCCC 302693 ||||| | ||| ||||||| ||||| || |||||| | | ||| ||| ||| ||||| Sbjct 1294028 TCAATCAAACCTTCACGACCGCCCATGGCGTGGAAGTAGAACTCGGTCGG-CGTCAGCCC 1294086 Query 302694 CCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGG--CG-AATCGTCGAACTTGGT 302750 ||| | || | || ||||| ||||| | |||||| || ||||||| |||| | Sbjct 1294087 GGCAAGGTACGAATTTTCCACGAAGCCACGAGACTCGGGACCGTAATCGTC---CTTGAT 1294143 Query 302751 AAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTG 302810 ||||| ||||| || | || | || | || |||||||| || || |||||||| Sbjct 1294144 GAAGTGCGGCAGTGTGCGTTTGCGGAAACCAAACGGAATACGCTTACCCTCGACGTTCTG 1294203 Query 302811 CTGTCCCAGGCACGAAATCATCTGC 302835 || || | || | ||| | |||| Sbjct 1294204 TTGGCCTACACAAGCAATAACCTGC 1294228 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471794706797118