Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20arabiensis_20[genbank_20GCA_5F000349185.1_202013-04-02] 1,214 sequences; 246,567,867 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq472 89.7 5e-13 >seq472 Length=2253382 Score = 89.7 bits (98), Expect = 5e-13 Identities = 492/778 (63%), Gaps = 23/778 (3%) Strand=Plus/Plus Query 136638 CACGGTGAATTGGATTGTATTCGCGGCAGGTTTAGTTCTCAGATAGTACATGCCCGTCTT 136697 ||| || || ||||| | ||| |||| || || || | ||||||||||||||| || || Sbjct 817653 CACCGTAAACTGGATCGCATTTACGGCCGGCTTGGTACGCAGATAGTACATGCCAGTTTT 817712 Query 136698 TAAACCCTTCTCCCAGGAATAATTATGTATAGATGACAAAATTTTATAGCTCGGATCGGC 136757 || ||| ||| |||| ||| ||| || || | || | |||| | || || || Sbjct 817713 CAATCCCATCTTCCAGCCATAGAAATGGATCGACGTCAGCTTGCCATAGTTTGGCTCCGC 817772 Query 136758 CACGAAAAGATTTAGCGATTGGCTCTGATCGATGTAAGGTCCGCGGTCTGCGGCCATGTT 136817 ||| || || | |||||| ||||||||| | | || || ||||||||||| || Sbjct 817773 GACGTGAATGTTGAACGATTGCGACTGATCGATAAACGCGCCACGATCTGCGGCCATTTT 817832 Query 136818 CAATAGTACTTTTTG--CTTAATTTCCCAAGCGGTTTTAAAGAGCTCCTTGACATTGGGC 136875 | | || |||| | || ||||| | ||||| | || || | | || Sbjct 817833 GAT--GCACGTTTTCACCGAGATCTCCCATACCGTTTTGTACAGGTCGCGAATTTCCTGC 817890 Query 136876 GGAATTTCATCGATATTCTGTACAGATCCGTTGTTTTTGATGATTT---TCATCATG--- 136929 || || | | || || || | ||||| ||||| | |||| || ||||| Sbjct 817891 GGTATAGCCGCAATCTTTTGGATCGATCCATTGTTGGACAGAATTTCGTTCTTCATGTCG 817950 Query 136930 AGATCAGTCGAGTATACGTTGCTCTCTATGAGTTTATCGACGAGATGCTGATTTACTACT 136989 ||||| | | |||| || | | | | ||||| || || || || Sbjct 817951 AGATCCCACAGACCCATGTTGGTC------AAATCCTGCAGAAGATGATGGTTCACCACC 818004 Query 136990 TGATATTCGCCCGATAGCACTCTGCGTAC-GTACAGATTACTAGTGAACGGCTCGAACGA 137048 || | |||||||| ||||| | || || ||| | || ||| ||||||||||||| Sbjct 818005 TGGAACTCGCCCGACAGCACGC-GCCTATTGTAAACGTTCGACGTGTACGGCTCGAACGA 818063 Query 137049 TTCGTTGTTACCCAAAATCTGTGCAGTCGTCGCTGTCGGCATGTAAGCGATCAACAATGA 137108 ||| ||||| || | ||| ||||| || | || |||||||| || | || || || Sbjct 818064 TTCATTGTTGCCGAGAATTTGTGCCGTGGAAGCCGTCGGCATCGGGGCCAACAGCAGCGA 818123 Query 137109 ATTCCGTAAACCGTGTACGGCCAATTGTTGCTTGAGCTCTTTCCAGTTCCACAGATTGTT 137168 ||| || | ||||| ||| | | || ||| | ||| |||||||||||||| | Sbjct 818124 ATTGCGAATGCCGTGCTTGGCGATCTTTTCCTTCAACTCGGCCCAGTTCCACAGATCCGT 818183 Query 137169 CGATTGGGTTATATTCCACAAATCAAACTGCAAAAGTCCGCGACTTGCAGGACTTTCTGC 137228 || || | ||||||| || ||||||| | || || | ||||| | | Sbjct 818184 CGGTT---CCTTGTTCCACATCTCGTACTGCAAGATGCCCTTGCTCACCGGACTGCCCTC 818240 Query 137229 ATAAGAATCATATGTTCCGTGCAGTTTCGCCAGTTCAATACTCTGGACTAGTGCGCCATA 137288 || | || || | ||| | | |||| ||| ||| | || ||||| || Sbjct 818241 GTACGTCTCGTACGGTCCATCTCGAGCGGCCAACTCACAGCTCGCTTCCAGCGCGCCGTA 818300 Query 137289 GTAAATAGTTTCGGAGATTTTTCTATTCAATTCTCTAGCTTCTTGGCTGTCGTAGGGCAT 137348 ||| || |||||| | |||| | ||| | | | ||| |||| ||| ||||| || || Sbjct 818301 GTAGATGGTTTCGAATATTTGTTGATTTAGCTTTTGAGCCTCTTCGCTTTCGTACGG-AT 818359 Query 137349 ATC-CAATATAGCGAAAGCATCTGCAAGTCCTTGAATACCGATACCGATAGGTCTGTG 137405 | | || | ||| ||||| || | || || | ||||| ||||| || ||||| Sbjct 818360 AGCGCATCAGGATGAACGCATCGGCCATGCCCTGCACGCCGATCCCGATCGGCCTGTG 818417 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445087645692480