Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20arabiensis_20[genbank_20GCA_5F000349185.1_202013-04-02] 1,214 sequences; 246,567,867 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq450 107 2e-18 >seq450 Length=2355463 Score = 107 bits (118), Expect = 2e-18 Identities = 235/344 (68%), Gaps = 6/344 (2%) Strand=Plus/Minus Query 146982 CTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAA 147041 ||| || ||||| || || || | ||||| ||| |||| ||||||||||| ||||| || Sbjct 1927752 CTTTAGTCCGGTGACATGCGCGATCATGTGGGTCAGCAAGGAGTAGCTGGCAATGTTAAA 1927693 Query 147042 GGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTC 147101 ||| || ||||| || | ||| |||| | || |||| ||| ||||| ||||| || || Sbjct 1927692 GGGCACGCCCAGACCTACGTCAGCCGAACGTTGATACATCTGACACGACAGCTCTCCATC 1927633 Query 147102 GGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGC 147161 ||| ||||||| || | |||||| ||||| || |||||| || | || | Sbjct 1927632 ACTAACGAAAAACTGTGCCAAGCAGTGGCATGGCGGTAGTGCCATGTTAGGAATATCAGA 1927573 Query 147162 GGGGTTCCAGGCCGAGACCACCAGCCGCCTGCTC-TCGGGGTTCCTCTTAATCTCTTCGA 147220 || ||||| || | | | | || | | || | ||| || ||||||| | ||||| Sbjct 1927572 AGGATTCCAAGCGCACATGATGATTCGAC-GATCGTAGGGATTGTTCTTAATTTTTTCGA 1927514 Query 147221 TAAC-CCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTC-CCGCAGTCCACGTA 147278 | || || | |||||| || | ||||| || ||| | ||| ||| ||| Sbjct 1927513 TCACTTCAGC-CAGCTGATCTATTCCCTGACCTGTGTA-ATCGTCGTGGCATGTTTTGTA 1927456 Query 147279 CCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCA 147322 |||| |||||||| | |||||| || || || || || |||| Sbjct 1927455 GGTGGCACCAAAGTGGCGCCACTGAAACCCATATACCGGGCCCA 1927412 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583479145569600