Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20arabiensis_20[genbank_20GCA_5F000349185.1_202013-04-02] 1,214 sequences; 246,567,867 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq472 324 2e-83 >seq472 Length=2253382 Score = 324 bits (358), Expect = 2e-83 Identities = 1185/1839 (64%), Gaps = 26/1839 (1%) Strand=Plus/Plus Query 68395 GCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAA 68454 || || || ||||| ||||||||||| || ||||||| || | |||| || |||||| Sbjct 817678 GCCGGCTTGGTACGCAGATAGTACATGCCAGTTTTCAATCCCATCTTCCAGCCATAGAAA 817737 Query 68455 TGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTT 68514 || || || || ||| ||| |||| || || | ||||| || | |||||| Sbjct 817738 TGGATCGACGTCAGCTTGCCATAGTTTGGCTCCGCGACGTGAATGTTGAACGATTGCGAC 817797 Query 68515 TGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGA-ATTTC 68573 |||||||| || || || | |||||| |||||||| || || ||| || || || Sbjct 817798 TGATCGATAAACGCGCCACGATCTGCGGCCATTTTGATGC-ACGTTTTCACCGAGATCTC 817856 Query 68574 CCAAATAGTCTTAAAAATCTGTTTGATATCATCTGGAAGGCTCGTA---TTTTGAATGGA 68630 ||| | || || | | | || || | || | || | ||||| || || Sbjct 817857 CCATACCGTTTTGTACAGGTCGCGAATTTCCTGCGGTATAGCCGCAATCTTTTGGATCGA 817916 Query 68631 TCCACCATCGGATATAATTATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAA 68690 |||| | ||| | |||| ||||| || || || ||||| | | || || Sbjct 817917 TCCATTGTTGGACAGAATTTCGTTCTTCATGTCGAGATCCCACAGACCCATGTTGGTCAA 817976 Query 68691 AACTCTAAGGAGATGCGGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTA 68750 | | || ||||| | || || | || || || || || | ||| | | | |||| Sbjct 817977 ATCCTGCAGAAGATGATGGTTCACCACCTGGAACTCGCCCGACAGCACGCGCCTATTGTA 818036 Query 68751 AATATTACTGGTATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGC 68810 || || || || || || | |||||||| || || |||||||| || || || || Sbjct 818037 AACGTTCGACGTGTACGGCTCGAACGATTCATTGTTGCCGAGAATTTGTGCCGTGGAAGC 818096 Query 68811 AGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTT 68870 || ||||| || |||| || | ||| | || || || | ||| || || || Sbjct 818097 CGTCGGCATCGGGGCCAACAGCAGCGAATTGCGAATGCCGTGCTTGGCGATCTTTTCCTT 818156 Query 68871 TAGATGTTTCCAATCCCAAAGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAAT 68930 | | ||| | ||| ||||| | ||| | ||||| | ||||| || | || Sbjct 818157 CAACTCGGCCCAGTTCCACAGATCCGTCGGTTCCTTGTTCCACATCTCGTACTGCAAGAT 818216 Query 68931 TCCGTTACTTGCATATGAT--CCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGT 68988 || || || || || || | || || || || ||||| || | | || | Sbjct 818217 GCCCTTGCT--CACCGGACTGCCCTCGTACGTCTCGTACGGTCCATCTCGAGCGGCCAAC 818274 Query 68989 TCACAACTTGCCTCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCT 69048 ||||| || || || | || ||||| || || |||||||| || | | ||| || | | Sbjct 818275 TCACAGCTCGCTTCCAGCGCGCCGTAGTAGATGGTTTCGAATATTTGTTGATTTAGCTTT 818334 Query 69049 TGTGCTTCTAGACTATCGAATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGA 69108 || || ||| || ||| | ||||| | | || || || ||||| |||| ||||| Sbjct 818335 TGAGCCTCTTCGCTTTCGTACGGATAGCGCATCAGGATGAACGCATCGGCCATGCCCTGC 818394 Query 69109 ACCCCAATACCGATAGGTCTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAA 69168 || || || ||||| || || || | | |||| || | | ||| || || | ||||| Sbjct 818395 ACGCCGATCCCGATCGGCCTGTGGCGCATATTGGAGCGCTTAGCCTCCGGCACGGGATAG 818454 Query 69169 TAATTAATATCTATAATTTTATTAAGATTTCGGACTACTACTTTAACCACGTCCTTTAGT 69228 ||||| | ||| || ||||| || ||||| || ||| ||| | || ||||| || Sbjct 818455 TAATTGACATCAATGATTTTGTTCAGATTGCGCGTTACGGTCTTAGCGACTTCCTTCAGC 818514 Query 69229 TTGAGAAAATCAAA----TCGTCCATCTATAACAAACATATTCAGTGCTACAGATGCTAG 69284 || ||| ||| | | ||| || || ||||||| |||| || | || || || Sbjct 818515 TTTGCAAAGTCATACGTTTTGTCTTGCTTTA-CAAACATGTTCAAGGCGATCGAGGCCAG 818573 Query 69285 ATTACAAACTGCTACCTCAT---TAGAATTTGCATATTGTATTATCTCTGTACATAGATT 69341 ||| || || |||||||||| | || | || | | ||||| || || | || Sbjct 818574 ATTGCATACCGCTACCTCATCCTTCGAC---GAGTACTCCACAATCTCAGTGCACAAGTT 818630 Query 69342 ACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTA 69401 ||||||||| || || | ||| ||||| ||||| || || || || |||||||| Sbjct 818631 GGAACATTTGATGGTGCCGATATTCTGCTGGTTACTTTTACGATTGCAAGCATCCTTGTA 818690 Query 69402 AAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCT 69461 || || |||| || ||||| | ||| |||||||| || | ||| | || ||| Sbjct 818691 CAGCATGTACGGTACGCCGGTTTCCACCTGCGATTCGATGATCGCAAACCACA-GATCCT 818749 Query 69462 A-GCATTTAT-TACGGTCTTGTAACGCTTCTCTTTTTCATATTGTGTATATAGCCGTTCG 69519 || || | | | | | | | || |||||| || || || || ||| ||| Sbjct 818750 GCGCCTTCACCTGCCG-CATAAAGCGACCCTCTTTCTCGTACCCCGTGTACAGCTTCTCG 818808 Query 69520 AATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCAC 69579 || || || ||||| || | || ||||| || | || ||||||| |||| Sbjct 818809 AACTCTTCGCCCCAGGTGTCCGATAGCCCGGGACAATCGTGCGGGCACATCAGGCTCCAC 818868 Query 69580 ACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGA 69639 | || | ||| || || | ||| || || || || ||||| || || ||| | Sbjct 818869 ATTTCGTTCGCCTCCACACGCTGCATGAACAGGTCCGGTATCCAGAGTGCGTAAAACATG 818928 Query 69640 TCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATA 69699 || | | | || || || || || ||||| || |||||||||||||| | ||| Sbjct 818929 TCCCGTGCGCGGACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCGAGAAACTCGAATATA 818988 Query 69700 TCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGA 69759 ||| |||||| || || ||||| || || | |||| || || || || || |||||| Sbjct 818989 TCACCATGCCACGGCTCGAGATAGATGGCGAATGCTCCAGGCCGCTTGTTGCCACCCTGA 819048 Query 69760 TCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTA 69819 || | ||| | || || || || ||||| | ||||||||| | | ||| || ||| | Sbjct 819049 TCGACGTACCGTGCCGTATTGTTGTAGACGCGCAGCATCGGCACCAGACCGTTCGATATC 819108 Query 69820 CCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGAT-AGACCTAT 69878 || || || || || || || |||| | ||||| ||| | | | | || || || Sbjct 819109 CCGTTCGTACCGGAGATGTACGTTCCCTTCGCGCGGATA-CAGTGCACGTTCAGTCCGAT 819167 Query 69879 TCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTAT 69938 || || ||| || || ||||| ||||| | |||| ||||| || || ||||| || Sbjct 819168 GCCACCGGCCGACTTTGAAATTAGGGCACACTGCTTCAGCGTGTCGTAGATGCCCTCAAT 819227 Query 69939 GCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGC 69998 |||||| || |||| | | || || ||| || | || || | || |||| Sbjct 819228 GCTATCTTCGGACATGGTCAACAGGAAGCAGGACGAAAGCTGGGGACGCTGCGTGGCCGC 819287 Query 69999 ATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTC 70058 ||| | || || || ||||| || || | || || ||||||||||| || || Sbjct 819288 CGCAAACATAGTTGGCGAGGCGTGGGTAAAGTAACGCTCGGACAGCAGATTGTAGGTCTC 819347 Query 70059 AATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTG 70118 || |||| || || ||| ||| || || || || || ||||||| ||| ||||| Sbjct 819348 GATCGCTGCATCGATGTCCTCGCCATGGATGCCAATAGCAACGCGCATCAGCATGTGCTG 819407 Query 70119 AGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAA 70178 || || || || |||| || || |||| | ||||||| ||||| |||||||| Sbjct 819408 GGGGCGCTCGACGATTTTTCCCTTGATCTTCAGTAAGTATGATCGTTCCAAGGTTTTAAA 819467 Query 70179 CCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAAT 70217 || ||||||||||| ||||| | |||||||| || Sbjct 819468 GCCGAAATAGTTGTACCCGAAGTCGCGATCGTAAATGAT 819506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686898376158960