Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20arabiensis_20[genbank_20GCA_5F000349185.1_202013-04-02] 1,214 sequences; 246,567,867 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq472 105 2e-17 >seq472 Length=2253382 Score = 105 bits (116), Expect = 2e-17 Identities = 274/410 (67%), Gaps = 6/410 (1%) Strand=Plus/Minus Query 254981 CCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAACGC 255040 || ||| | || || | |||||| ||| || ||||||||||| || ||| ||| || Sbjct 819089 CCGATGCTGCGCGTCTACAACAATACGGCACGGTACGTCGATCAGGGTGGCAACAAGCGG 819030 Query 255041 CCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGACATTGAACGGTTTTTACTG 255100 || ||||| ||| ||||||| || ||||||||||| | || || |||| | Sbjct 819029 CCTGGAGCATTCGCCATCTATCTCGAGCCGTGGCATGGTGATATATTCGAGTTTCTCGAT 818970 Query 255101 CTGTCCGACAAGACCGGCACCGAGGAGCTGATCGCCCGCGACATCTACACCGCTGTCTGG 255160 ||| | || ||||||| |||||| | ||| || ||||| | ||| ||||| Sbjct 818969 CTGAAGAAAAACACCGGCAAGGAGGAGGTCCGCGCACGGGACATGTTTTACGCACTCTGG 818910 Query 255161 -TGCTGCGATCTGTTTATGCGACGCGTGGA-ACGAGACGAGACCTGGAGCCTCATGTGTC 255218 | | | || ||||| |||| || ||||| ||| |||| | |||||||| ||||| | Sbjct 818909 ATACCG-GACCTGTTCATGCAGCGTGTGGAGGCGA-ACGAAATGTGGAGCCTGATGTGCC 818852 Query 255219 CCAACTTATCGCCCGGTCTAGTCGACTCTTGGGGTGACGAGTTTGAAAAACTGTATCTGG 255278 | || | ||||| ||| ||| | ||||| || ||||| || || ||||| || Sbjct 818851 CGCACGATTGTCCCGGGCTATCGGACACCTGGGGCGAAGAGTTCGAGAAGCTGTACACGG 818792 Query 255279 AGTACGAGCGTGCCGGCCGGTTCGTACGCCAAGTGCCCGCGAAGAAGATCTGGAACACGA 255338 ||||||| | || || || | || || ||| ||| || | | ||| ||| Sbjct 818791 GGTACGAGAAAGAGGGTCGCTTTATGCGGCAGGTGAAGGCGCAGGATCTGTGGTTTGCGA 818732 Query 255339 TGGTGCGCAT-GCAGCTGGAAACCGGAATGCCGTTCCTATTGCACAAAGA 255387 | | || || |||| |||||||||| | |||| | | || |||| || Sbjct 818731 TCAT-CGAATCGCAGGTGGAAACCGGCGTACCGTACATGCTGTACAAGGA 818683 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588311294426230