Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20arabiensis_20[genbank_20GCA_5F000349185.1_202013-04-02] 1,214 sequences; 246,567,867 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq328 100 3e-16 >seq328 Length=4755327 Score = 100 bits (110), Expect = 3e-16 Identities = 162/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 94723 GCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT 94782 |||||| |||| | ||||| | | ||| ||||||||||| |||| ||| | Sbjct 1649217 GCCATCGAAACGCTGCCGTGCGTGAAGCGGAAGGCGGATTGGGCGCTGAACTGGATCTCG 1649276 Query 94783 ACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTC 94842 | ||| | ||||| ||||| || | || || || ||||||||||||||| Sbjct 1649277 AGCAAGAAGGCCAACTTTGGCGAGCGGGTCGTGGCTTTCGCTGCGGTTGAGGGTATCTTC 1649336 Query 94843 TTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTC 94902 ||| ||| |||| ||| || | ||||| |||||||| || || ||||| || ||| Sbjct 1649337 TTCAGCGGTAGCTTCGCCGCGATCTTCTGGCTGAAGAAGCGTGGCCTGATGCCGGGACTC 1649396 Query 94903 TGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 |||||| |||||||| ||||| || ||||| || || ||| || ||||| Sbjct 1649397 ACCTTCTCGAACGAGCTGATCTCGCGCGACGAAGGGCTGCACTGCGACTTTGC 1649449 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583251949017360