Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20arabiensis_20[genbank_20GCA_5F000349185.1_202013-04-02] 1,214 sequences; 246,567,867 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq450 109 4e-19 >seq450 Length=2355463 Score = 109 bits (120), Expect = 4e-19 Identities = 158/223 (71%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 29713 TAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGG 29772 ||| |||||||| || || ||||||| || || | ||||||||||| ||||||||||| Sbjct 1927749 TAGTCCGGTGACATGCGCGATCATGTGGGTCAGCAAGGAGTAGCTGGCAATGTTAAAGGG 1927690 Query 29773 CACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCT 29832 ||| || || || | ||| | || | || || | ||| ||||| |||||||| || || Sbjct 1927689 CACGCCCAGACCTACGTCAGCCGAACGTTGATACATCTGACACGACAGCTCTCCATCACT 1927630 Query 29833 CACGTAAAACTGACACATGGCATGGCACGGAGGAAGGGCCATGAGACCCAAGTCTTTGGG 29892 ||| ||||||| || | ||||| || || || |||||| | | || || Sbjct 1927629 AACGAAAAACTGTGCCAAGCAGTGGCATGGCGGTAGTGCCATGTTAGGAATATCAGAAGG 1927570 Query 29893 GTTCCAGGCACACACGATGATGCGCCTGTCTTCTGGGTTGTTC 29935 ||||| || |||| |||||| || | || | || |||||| Sbjct 1927569 ATTCCAAGCGCACATGATGATTCGACGATCGTAGGGATTGTTC 1927527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406157190561604