Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20arabiensis_20[genbank_20GCA_5F000349185.1_202013-04-02] 1,214 sequences; 246,567,867 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq450 122 6e-23 >seq450 Length=2355463 Score = 122 bits (134), Expect = 6e-23 Identities = 163/225 (72%), Gaps = 4/225 (2%) Strand=Plus/Minus Query 27207 TAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGG 27266 ||| |||||||| || || ||||||| || || | ||||||||||| ||||||||||| Sbjct 1927749 TAGTCCGGTGACATGCGCGATCATGTGGGTCAGCAAGGAGTAGCTGGCAATGTTAAAGGG 1927690 Query 27267 TACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCT 27326 || || || || | ||| |||| | || || | ||||||||| ||||||||||| || Sbjct 1927689 CACGCCCAGACCTACGTCAGCCGAACGTTGATACATCTGACACGACAGCTCTCCATCACT 1927630 Query 27327 TACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCATG--AGGCCCAAGTCTTTG 27384 ||| ||||||| | | |||||| || || || |||||| ||| | || Sbjct 1927629 AACGAAAAACTGTGCCAAGCAGTGGCATGGCGGTAGTGCCATGTTAGG--AATATCAGAA 1927572 Query 27385 GGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTC 27429 || ||||| ||||||| |||||| || | || | || |||||| Sbjct 1927571 GGATTCCAAGCGCACATGATGATTCGACGATCGTAGGGATTGTTC 1927527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369501732910034