Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20arabiensis_20[genbank_20GCA_5F000349185.1_202013-04-02] 1,214 sequences; 246,567,867 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq472 288 1e-72 >seq472 Length=2253382 Score = 288 bits (318), Expect = 1e-72 Identities = 1188/1866 (64%), Gaps = 16/1866 (1%) Strand=Plus/Plus Query 76771 TCTTATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATAC 76830 |||| |||| |||||||| || | | || || || ||||| ||||||||||| | Sbjct 817646 TCTTGTCCACCGTAAACTGGATCGCATTTACGGCCGGCTTGGTACGCAGATAGTACATGC 817705 Query 76831 CAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAG 76890 ||||||| | |||| |||| || |||||||| || ||||| ||| ||| | | Sbjct 817706 CAGTTTTCAATCCCATCTTCCAGCCATAGAAATGGATCGACGTCAGCTTGCCATAGTTTG 817765 Query 76891 GATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCG 76950 | || || | ||||| || | ||| || |||||||| || || || | ||| || | Sbjct 817766 GCTCCGCGACGTGAATGTTGAACGATTGCGACTGATCGATAAACGCGCCACGATCTGCGG 817825 Query 76951 CCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATAT 77010 ||||||| || || || | || ||||| | |||||| | | | || | Sbjct 817826 CCATTTTGATGCACGTTTTCACCGAGATCTCCCATACCGTTTTGTACAGGTCGCGAATTT 817885 Query 77011 CATCTGGAAGGTTTGTA---TTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTA 77067 | | || | | | ||||| || || ||| | || | |||| ||||| | Sbjct 817886 CCTGCGGTATAGCCGCAATCTTTTGGATCGATCCATTGTTGGACAGAATTTCGTTCTTCA 817945 Query 77068 TATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTT 77127 | || || ||||| | | | || ||| | || |||||| | || || | | Sbjct 817946 TGTCGAGATCCCACAGACCCATGTTGGTCAAATCCTGCAGAAGATGATGGTTCACCACCT 818005 Query 77128 GAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATT 77187 | || || || |||| || | | | |||||| || || || || || | |||| Sbjct 818006 GGAACTCGCCCGACAGCACGCGCCTATTGTAAACGTTCGACGTGTACGGCTCGAACGATT 818065 Query 77188 CATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTAT 77247 ||||||| || | |||||| || || ||||| || ||||| || |||| || | || Sbjct 818066 CATTGTTGCCGAGAATTTGTGCCGTGGAAGCCGTCGGCATCGGGGCCAACAGCAGCGAAT 818125 Query 77248 TTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAG 77307 | | | || || | ||| || || || | | ||| | ||| ||||| | | Sbjct 818126 TGCGAATGCCGTGCTTGGCGATCTTTTCCTTCAACTCGGCCCAGTTCCACAGATCCGTCG 818185 Query 77308 GTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGAT--CCATTATA 77365 || | | ||| | ||||| || | || || || || || || || | || Sbjct 818186 GTTCCTTGTTCCACATCTCGTACTGCAAGATGCCCTTGCT--CACCGGACTGCCCTCGTA 818243 Query 77366 TGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATA 77425 || || || ||||| ||| | || | ||||| |||||||||| || ||||| || Sbjct 818244 CGTCTCGTACGGTCCATCTCGAGCGGCCAACTCACAGCTCGCTTCCAGCGCGCCGTAGTA 818303 Query 77426 AATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAATG 77485 || |||||||| || | | ||| || | ||| || || || || ||||||| | Sbjct 818304 GATGGTTTCGAATATTTGTTGATTTAGCTTTTGAGCCTCTTCGCTTTCGTACGGATAGCG 818363 Query 77486 TAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTT 77545 | || || || ||||| || | ||||| || || || || || || || || | | | Sbjct 818364 CATCAGGATGAACGCATCGGCCATGCCCTGCACGCCGATCCCGATCGGCCTGTGGCGCAT 818423 Query 77546 ATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATT 77605 |||||| ||||| || || | ||||| ||||| | || || ||||| || ||||| Sbjct 818424 ATTGGAGCGCTTAGCCTCCGGCACGGGATAGTAATTGACATCAATGATTTTGTTCAGATT 818483 Query 77606 TCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTTCCATCTA---T 77662 | || ||| | || ||||| || || ||| ||| | || ||| | Sbjct 818484 GCGCGTTACGGTCTTAGCGACTTCCTTCAGCTTTGCAAAGTCATACGTTTTGTCTTGCTT 818543 Query 77663 AACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGCGTTG-- 77720 |||||||||||||| || || || || ||||| || || |||||||||| | | | Sbjct 818544 TACAAACATGTTCAAGGCGATCGAGGCCAGATTGCATACCGCTACCTCAT--CCTTCGAC 818601 Query 77721 GCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGG 77780 | || | | ||||| || || | || ||||||||| ||||| | ||| || ||| Sbjct 818602 GAGTACTCCACAATCTCAGTGCACAAGTTGGAACATTTGATGGTGCCGATATTCTGCTGG 818661 Query 77781 TTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGT 77840 || || || |||||| | ||||| || || || |||| |||||||| | ||| Sbjct 818662 TTACTTTTACGATTGCAAGCATCCTTGTACAGCATGTACGGTACGCCGGTTTCCACCTGC 818721 Query 77841 GATTCGATAATAGATTTCCAGACGACTCT-AGCTTTTATCATAGATTTGTATCGCCTCTC 77899 |||||||| || | ||| | || || || || | | | | || | ||| Sbjct 818722 GATTCGATGATCGCAAACCACA-GATCCTGCGCCTTCACCTGCCGCATAAAGCGACCCTC 818780 Query 77900 TCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGG 77959 | | || || || || ||| || || || || ||||| || | || || Sbjct 818781 TTTCTCGTACCCCGTGTACAGCTTCTCGAACTCTTCGCCCCAGGTGTCCGATAGCCCGGG 818840 Query 77960 GCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAG 78019 || || | |||||||||| ||| | | ||| || || | ||| || || Sbjct 818841 ACAATCGTGCGGGCACATCAGGCTCCACATTTCGTTCGCCTCCACACGCTGCATGAACAG 818900 Query 78020 ATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATT 78079 || |||||||| || || ||| | || || | | || || || || || || Sbjct 818901 GTCCGGTATCCAGAGTGCGTAAAACATGTCCCGTGCGCGGACCTCCTCCTTGCCGGTGTT 818960 Query 78080 CTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCAT 78139 || || |||||||||||||| | |||||| |||||| || || ||||| || || | Sbjct 818961 TTTCTTCAGATCGAGAAACTCGAATATATCACCATGCCACGGCTCGAGATAGATGGCGAA 819020 Query 78140 AACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCT 78199 ||||||| || || || || |||||||| | || | || || || || || || | Sbjct 819021 TGCTCCAGGCCGCTTGTTGCCACCCTGATCGACGTACCGTGCCGTATTGTTGTAGACGCG 819080 Query 78200 CAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGC 78259 || ||| || | | |||||| ||| | || || || || || || || |||| | || Sbjct 819081 CAGCATCGGCACCAGACCGTTCGATATCCCGTTCGTACCGGAGATGTACGTTCCCTTCGC 819140 Query 78260 GCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACG 78319 ||| ||| | | | || || || || ||| ||| || ||||| || || | Sbjct 819141 GCGGATACAGTGCACGTTCAGTCCGATGCCACCGGCCGACTTTGAAATTAGGGCACACTG 819200 Query 78320 TTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCT 78379 |||| || |||||||| ||||| || || || || |||| | | || || ||| Sbjct 819201 CTTCAGCGTGTCGTAGATGCCCTCAATGCTATCTTCGGACATGGTCAACAGGAAGCAGGA 819260 Query 78380 AGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCA 78439 || | || || | || | || ||| | || || || || || ||||| | Sbjct 819261 CGAAAGCTGGGGACGCTGCGTGGCCGCCGCAAACATAGTTGGCGAGGCGTGGGTAAAGTA 819320 Query 78440 TTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCC 78499 || || || |||||||| || || || |||| || |||||| ||| || || Sbjct 819321 ACGCTCGGACAGCAGATTGTAGGTCTCGATCGCTGCATCGATGTCCTCGCCATGGATGCC 819380 Query 78500 TACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAA 78559 | || || ||||||| ||| ||||| || | || || | || || || |||| Sbjct 819381 AATAGCAACGCGCATCAGCATGTGCTGGGGGCGCTCGACGATTTTTCCCTTGATCTTCAG 819440 Query 78560 CAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTA 78619 ||||||||| |||||| |||||||| || ||||||||||| ||||| | ||||| Sbjct 819441 TAAGTATGATCGTTCCAAGGTTTTAAAGCCGAAATAGTTGTACCCGAAGTCGCGATCGTA 819500 Query 78620 AATAAT 78625 ||| || Sbjct 819501 AATGAT 819506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694658258400960