Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20arabiensis_20[genbank_20GCA_5F000349185.1_202013-04-02] 1,214 sequences; 246,567,867 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq472 217 2e-51 >seq472 Length=2253382 Score = 217 bits (240), Expect = 2e-51 Identities = 1182/1879 (63%), Gaps = 18/1879 (1%) Strand=Plus/Plus Query 75366 TCTTATCCAACGTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATAC 75425 |||| |||| ||| ||||| || | | || || || ||||| ||||||||||| | Sbjct 817646 TCTTGTCCACCGTAAACTGGATCGCATTTACGGCCGGCTTGGTACGCAGATAGTACATGC 817705 Query 75426 CAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCG 75485 ||||||| | |||| |||| || |||||||| || || || ||| ||| | | Sbjct 817706 CAGTTTTCAATCCCATCTTCCAGCCATAGAAATGGATCGACGTCAGCTTGCCATAGTTTG 817765 Query 75486 GATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCG 75545 | || || | ||||| || | ||| || |||||||| || || || | ||| || | Sbjct 817766 GCTCCGCGACGTGAATGTTGAACGATTGCGACTGATCGATAAACGCGCCACGATCTGCGG 817825 Query 75546 CCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATAT 75605 ||||||| || || || | || ||||| | |||||| | | | || | Sbjct 817826 CCATTTTGATGCACGTTTTCACCGAGATCTCCCATACCGTTTTGTACAGGTCGCGAATTT 817885 Query 75606 CATCTGGAAGATTTGTA---TTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGA 75662 | | || | | | | ||||| || ||||| | || | |||| ||||| | Sbjct 817886 CCTGCGGTATAGCCGCAATCTTTTGGATCGATCCATTGTTGGACAGAATTTCGTTCTTCA 817945 Query 75663 TCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTT 75722 | || || ||||| | | ||| ||| | || |||||| | || || | | Sbjct 817946 TGTCGAGATCCCACAGACCCATGTTGGTCAAATCCTGCAGAAGATGATGGTTCACCACCT 818005 Query 75723 GAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATT 75782 | || || || |||| || | | | |||||| || || || || || | |||| Sbjct 818006 GGAACTCGCCCGACAGCACGCGCCTATTGTAAACGTTCGACGTGTACGGCTCGAACGATT 818065 Query 75783 CATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTAT 75842 ||||||| || | |||||| || || ||||| |||||||| || |||| || | || Sbjct 818066 CATTGTTGCCGAGAATTTGTGCCGTGGAAGCCGTCGGCATCGGGGCCAACAGCAGCGAAT 818125 Query 75843 TTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGATG 75902 | | | || || | ||| || || || | | ||| | ||| ||||| | | Sbjct 818126 TGCGAATGCCGTGCTTGGCGATCTTTTCCTTCAACTCGGCCCAGTTCCACAGATCCGTCG 818185 Query 75903 GTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGAT--CCATTATA 75960 || | | ||| | ||||| || | || || ||||| || || || | || Sbjct 818186 GTTCCTTGTTCCACATCTCGTACTGCAAGATGCCCTTGCT--CACCGGACTGCCCTCGTA 818243 Query 75961 TGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAATA 76020 || ||||| | || || | || | || || ||||| || | ||| ||||| || Sbjct 818244 CGTCTCGTACGGTCCATCTCGAGCGGCCAACTCACAGCTCGCTTCCAGCGCGCCGTAGTA 818303 Query 76021 AATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGATAATG 76080 || |||||||| || | | ||| || | ||| || || || || | ||||| | Sbjct 818304 GATGGTTTCGAATATTTGTTGATTTAGCTTTTGAGCCTCTTCGCTTTCGTACGGATAGCG 818363 Query 76081 TAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTT 76140 | || || || ||||| || | ||||| || || || || || || || || | | | Sbjct 818364 CATCAGGATGAACGCATCGGCCATGCCCTGCACGCCGATCCCGATCGGCCTGTGGCGCAT 818423 Query 76141 ATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATT 76200 |||||| | ||| || || | || || ||||| | ||| || ||||| || ||||| Sbjct 818424 ATTGGAGCGCTTAGCCTCCGGCACGGGATAGTAATTGACATCAATGATTTTGTTCAGATT 818483 Query 76201 TCTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTCCATCTATC-- 76258 | || ||| | || ||||| || || ||| ||| | || ||| | Sbjct 818484 GCGCGTTACGGTCTTAGCGACTTCCTTCAGCTTTGCAAAGTCATACGTTTTGTCTTGCTT 818543 Query 76259 -ACAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTGGC 76317 |||||||| || | || || || || ||||| || || |||||||||| | | | | Sbjct 818544 TACAAACATGTTCAAGGCGATCGAGGCCAGATTGCATACCGCTACCTCATC--CTTCGAC 818601 Query 76318 A--TATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGG 76375 || | | ||||| ||||| | || ||| ||||| || || | ||| || ||| Sbjct 818602 GAGTACTCCACAATCTCAGTGCACAAGTTGGAACATTTGATGGTGCCGATATTCTGCTGG 818661 Query 76376 TTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGT 76435 || || || || || | ||||| || || | |||| || ||||| | ||| Sbjct 818662 TTACTTTTACGATTGCAAGCATCCTTGTACAGCATGTACGGTACGCCGGTTTCCACCTGC 818721 Query 76436 GATTCGATAATAGATTTCCAGACGACTCTA-GCTTTTATTATAGATTTGTATCGCTTCTC 76494 |||||||| || | ||| | || || || || | | | || ||| Sbjct 818722 GATTCGATGATCGCAAACCACA-GATCCTGCGCCTTCACCTGCCGCATAAAGCGACCCTC 818780 Query 76495 TCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGG 76554 | | || || || || | | || || || || ||||| || | || || Sbjct 818781 TTTCTCGTACCCCGTGTACAGCTTCTCGAACTCTTCGCCCCAGGTGTCCGATAGCCCGGG 818840 Query 76555 ACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAG 76614 ||| || | ||| ||||||| |||| | | ||| || || | ||| || || Sbjct 818841 ACAATCGTGCGGGCACATCAGGCTCCACATTTCGTTCGCCTCCACACGCTGCATGAACAG 818900 Query 76615 ATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATT 76674 || |||||||| || || ||| | || || | | || || || || || || Sbjct 818901 GTCCGGTATCCAGAGTGCGTAAAACATGTCCCGTGCGCGGACCTCCTCCTTGCCGGTGTT 818960 Query 76675 CTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCAT 76734 || || ||||| || ||||| | |||||| |||||| || || ||||| || || | Sbjct 818961 TTTCTTCAGATCGAGAAACTCGAATATATCACCATGCCACGGCTCGAGATAGATGGCGAA 819020 Query 76735 AACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCT 76794 | || || || || || || |||||||| | || | || || || || || || | Sbjct 819021 TGCTCCAGGCCGCTTGTTGCCACCCTGATCGACGTACCGTGCCGTATTGTTGTAGACGCG 819080 Query 76795 CAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGC 76854 || ||| || | | ||||| ||| | || || || || || || || |||| || Sbjct 819081 CAGCATCGGCACCAGACCGTTCGATATCCCGTTCGTACCGGAGATGTACGTTCCCTTCGC 819140 Query 76855 ACGAATATTACTAATAGAT-AGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGC 76913 || ||| | | | | || || || || || ||| || || ||||| ||||| Sbjct 819141 GCGGATAC-AGTGCACGTTCAGTCCGATGCCACCGGCCGACTTTGAAATTAGGGCACACT 819199 Query 76914 GTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGC 76973 | |||| ||||| ||||||||||| || ||||| || |||| | | || || ||| Sbjct 819200 GCTTCAGCGTGTCGTAGATGCCCTCAATGCTATCTTCGGACATGGTCAACAGGAAGCAGG 819259 Query 76974 TAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACC 77033 || | || || | || | || ||||| || || || || || || || Sbjct 819260 ACGAAAGCTGGGGACGCTGCGTGGCCGCCGCAAACATAGTTGGCGAGGCGTGGGTAAAGT 819319 Query 77034 ATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTC 77093 | || || || |||||||| || || || |||| || || ||| ||| || | Sbjct 819320 AACGCTCGGACAGCAGATTGTAGGTCTCGATCGCTGCATCGATGTCCTCGCCATGGATGC 819379 Query 77094 CTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCA 77153 | | ||| || ||||||| ||| ||||| || || || || | || || || |||| Sbjct 819380 CAATAGCAACGCGCATCAGCATGTGCTGGGGGCGCTCGACGATTTTTCCCTTGATCTTCA 819439 Query 77154 ACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGT 77213 ||||||||| |||||| |||||||| || ||||||||||| ||||| | |||| Sbjct 819440 GTAAGTATGATCGTTCCAAGGTTTTAAAGCCGAAATAGTTGTACCCGAAGTCGCGATCGT 819499 Query 77214 AAATAATAACCGAATTTAG 77232 |||| || |||| || || Sbjct 819500 AAATGATGGCCGAGTTCAG 819518 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712923581220480