Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20arabiensis_20[genbank_20GCA_5F000349185.1_202013-04-02] 1,214 sequences; 246,567,867 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq299 127 3e-24 >seq299 Length=36164 Score = 127 bits (140), Expect = 3e-24 Identities = 273/407 (67%), Gaps = 22/407 (5%) Strand=Plus/Plus Query 155739 GCCGTCGATTGAGCGGCGCGTACCAACCCTTCCAATTCAGCGCCGCTGTAATTTTTAGT- 155797 || || ||||| || || |||||||| ||||||| |||||| ||||| |||||||||| Sbjct 15946 GCGGTGGATTGCGCTGCACGTACCAATCCTTCCAGTTCAGCACCGCTAAAATTTTTAGTC 16005 Query 155798 -TTCAACGGCTATTTTATTTAAGTCTACGTCGGAAGCTAATATGTTGTGAGATTTCAT-- 155854 || || | | | ||||||||||| | |||||| | || ||||| Sbjct 16006 TTTTGAC--CAAGCTCGCGCAAGTCTACGTCAGGAGCTAACTTTTTAAACTCCTTCATGC 16063 Query 155855 -TTTAGCAACGTGCACCTTTAAAATTTGAAGACGCCCCTTTTCATCGGGTAATCCAATTT 155913 | ||| | || | || |||||||| | ||| || | ||||| || | | |||| Sbjct 16064 GTCTAGTA---TGTATATTCAAAATTTGCACACGACCTTCTTCATTAGGAAGACTGATTT 16120 Query 155914 CTATCTTCAATTCCAACCGCCCAGGTCTTAATAATGCTTCGTCAATTAAGTCGGGTCTGT 155973 | || | | ||| | || ||||||||||| ||||||||||| || | || || | Sbjct 16121 CCATTTGAACTTCTAGACGACCAGGTCTTAACAATGCTTCGTCTATCATATCTCTTCGAT 16180 Query 155974 TGGTCATACCTATGATTAAAATGTTGTTTAAAGATTCTACACCGTCTATTTTAGACAATA 156033 ||||||| || || | |||||||||||||| || ||||| |||||||| | ||| | Sbjct 16181 TGGTCATTCCAATTACCAAAATGTTGTTTAATTGCTCAACACCATCTATTTTTGCCAACA 16240 Query 156034 ATTGATTGACTACGGCGTCGTGC------------GTGGCGTTATCACCGCGTTTTTTAC 156081 ||| ||||| || | || ||| | || | ||| || ||||| Sbjct 16241 GTTGGTTGACAACCGTATCATGCACACCAGAATTTCCGCCGACAGTACCACGAGCTTTAC 16300 Query 156082 ACAGAGCATCTATTTCATCGAAGACGATAACGTGTAATCCGCTGGCT 156128 | | ||||||||||||||||| | || | |||||| || || ||| Sbjct 16301 AAATTGCATCTATTTCATCGAAAATTATTATGTGTAAACCACTTGCT 16347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 667065077133840