Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20atroparvus_20[genbank_20GCA_5F000473505.1_202013-09-30] 1,371 sequences; 224,290,125 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq273 95.1 3e-14 seq1 95.1 3e-14 seq10 93.3 9e-14 seq29 91.5 3e-13 seq24 91.5 3e-13 seq230 89.7 1e-12 seq12 89.7 1e-12 seq11 89.7 1e-12 seq5 89.7 1e-12 seq4 89.7 1e-12 >seq273 Length=17413 Score = 95.1 bits (104), Expect = 3e-14 Identities = 73/86 (85%), Gaps = 2/86 (2%) Strand=Plus/Plus Query 165698 CTTAAAA--CGCTTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGG 165755 ||||||| ||| ||||| ||||||||||||||||||| ||||| ||||||| || Sbjct 10847 CTTAAAATCCGCAAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGG 10906 Query 165756 TCGTGGGTTCGAGCCCCACGATGGGC 165781 |||||||||||||||||||| ||||| Sbjct 10907 TCGTGGGTTCGAGCCCCACGTTGGGC 10932 >seq1 Length=20238125 Score = 95.1 bits (104), Expect = 3e-14 Identities = 144/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 281740 TCGTGAAGATATACCTTGCACTCGCGTGGTCTTTACCACCCTGCAGCCTCGACCCAAACT 281799 |||||||||| || | | || ||| || || ||||| || || || || |||| Sbjct 2775557 TCGTGAAGATGTAACGCGGGCTGGCGCTATCCTTGCCACCGGTCAACCGCGTACCGAACT 2775616 Query 281800 GACCCTCCGGCAACAACCAGTTAATGTTATTGCTCCCGACGTAATCCTGAGCCAGGTTGA 281859 |||| |||| ||| | ||| ||||| || || ||||| |||| ||| |||||||||| Sbjct 2775617 GACCGCCCGGGTACAGCAGGTTGATGTTGTTACTGCCGACATAATTCTGCGCCAGGTTGA 2775676 Query 281860 CGATTGTCCCCTGAAGCGATACCTCACCGTGGTGATAGGCGCTGTGTTCGGCAACATAAC 281919 ||| || || ||||| |||| ||||||||||||||| ||| || || ||| Sbjct 2775677 TGATCGTGCCGCACAGCGACGCCTCGCCGTGGTGATAGGCGGACATTTCCGCGACCGAAC 2775736 Query 281920 CACTGAACTGTGCTACCTTCACGTC 281944 | | ||| || |||||||| || Sbjct 2775737 CGGCCAGCTGGGCCACCTTCACCTC 2775761 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||| Sbjct 5163947 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 5163888 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 5163887 CCCCACGTTGGGC 5163875 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||| Sbjct 5167370 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 5167429 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 5167430 CCCCACGTTGGGC 5167442 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||| Sbjct 13241831 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 13241890 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 13241891 CCCCACGTTGGGC 13241903 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 485910 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 485851 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 485850 CCCACGTTGGGC 485839 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 517465 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 517524 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 517525 CCCACGTTGGGC 517536 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 16217187 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 16217246 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 16217247 CCCACGTTGGGC 16217258 >seq10 Length=7496699 Score = 93.3 bits (102), Expect = 9e-14 Identities = 277/425 (65%), Gaps = 2/425 (0%) Strand=Plus/Minus Query 61079 TCGAATTTGTCAAGCATCAACATCTGAACTGTATGGAAAAGTTCAAGAAATTCCTCAAAC 61138 |||| | | ||| || || || || || || || || || || |||| || || | Sbjct 1111542 TCGATTCTATCAGGCGTCCACTTCCGAGCTTTACGGCAAGGTGGTGGAAACGCCACAGAA 1111483 Query 61139 AGAAAGGACTCCGTTTTATCCTCGTAGCCCGTATGGTGTTGCAAAACTATACGCTTACTG 61198 |||| ||| || || ||||| || ||||| | ||||||||| |||| ||||| Sbjct 1111482 TGAAAAGACACCCTTCTATCCGCGCTCTCCGTACGCCTGTGCAAAACTGTACGGCTACTG 1111423 Query 61199 GATTTGTAAAAATTACCGCGAGTCGTATGGAATGTTTGTATGTAACTCGATTTGTTTCAA 61258 ||| | |||||||||||| |||| | ||||||| || || || ||||| Sbjct 1111422 GATCGTGATAAATTACCGCGAAGCGTACGACATGTTTGCCTGCAATGGCATCCTGTTCAA 1111363 Query 61259 TCACGAGAGTCCCAATAGAGGTCATCAGTTTGTGACTCGTAAAATTACGAAGGCGGTTGC 61318 || ||| |||| | || | | ||||| || || || || ||| |||| || Sbjct 1111362 CCATGAGTCTCCCCGCCGGGGAGAAAATTTTGTCACCCGCAAGATAACGCGCTCGGTGGC 1111303 Query 61319 AAATATTTTTAACGGTGTCGAAAAATGCATGTATCTAGGAAACATAGACTCTAAAAGAGA 61378 ||| |||| |||| | | ||| || | || || || | ||||| || | || Sbjct 1111302 AAAAATTTCGCTCGGTCAACAGGAGTGCTTGGAGCTGGGCAATCTCGACTCGAAGCGTGA 1111243 Query 61379 TTGGGGATATGCGGAAGATTATATCGAGGCTATGTGGTTGATGTTGCAACAAGATACTCC 61438 ||||| | ||| | || || ||||||| |||||| ||||| |||| || || | || Sbjct 1111242 CTGGGGCCACGCGCAGGACTACGTCGAGGCCATGTGGCTGATGATGCAGCAGGAGAAACC 1111183 Query 61439 AGATGACTACGTTATTGCGACTGGACAGACG-ACGAGTGTCCGTGAATTCGTAAAAATAG 61497 || || | || || || || || ||||| || | || || |||||||| ||| Sbjct 1111182 GGAAGATTTTGTCATCGCCACCGGTGAGACGCACTCG-GTGCGAGAATTCGTCGAAAAGT 1111124 Query 61498 CGTTC 61502 ||||| Sbjct 1111123 CGTTC 1111119 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 4960967 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 4961026 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 4961027 CCCACGTTGGGC 4961038 >seq29 Length=1542149 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||| Sbjct 1041899 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 1041840 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 1041839 CCCCACGTTGGGC 1041827 >seq24 Length=2366404 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||| Sbjct 1518393 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 1518334 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 1518333 CCCCACGTTGGGC 1518321 >seq230 Length=17829 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 14846 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 14905 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 14906 CCCACGTTGGGC 14917 >seq12 Length=8157176 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 765115 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 765056 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 765055 CCCACGTTGGGC 765044 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 769285 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 769226 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 769225 CCCACGTTGGGC 769214 >seq11 Length=7594930 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 3990742 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 3990683 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 3990682 CCCACGTTGGGC 3990671 >seq5 Length=11808074 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 5628386 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 5628327 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 5628326 CCCACGTTGGGC 5628315 >seq4 Length=12071184 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 2295500 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 2295559 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 2295560 CCCACGTTGGGC 2295571 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057805418329730