Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20atroparvus_20[genbank_20GCA_5F000473505.1_202013-09-30] 1,371 sequences; 224,290,125 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq10 114 1e-20 >seq10 Length=7496699 Score = 114 bits (126), Expect = 1e-20 Identities = 181/257 (70%), Gaps = 2/257 (1%) Strand=Plus/Plus Query 16952 TTAAACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTA 17011 || ||||||||||| || || ||||| || | |||||||| | || || ||||| Sbjct 495513 TTGAACATCAGACAGGCAAAGTCGCAGTGCAGGCCCTCGTCGCGCGAAATCAGCTCGTTC 495572 Query 17012 GAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGAC 17071 || || ||||| || |||||| || || ||||| | ||| || || |||||||| | Sbjct 495573 GAGAAGGTCAAACCCGGCATCAGGCCCCGCTTCTTCAGCCAGAAAATGGCGGCGAAGCTC 495632 Query 17072 CCAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCG 17131 || |||||| || |||||||||| |||||||| | | || ||| | | | || Sbjct 495633 CCGCTAAAGAAGATGCCCTCGACGGCGGCAAACGCAACCACCCGCTCGCCAAAGTTGGCC 495692 Query 17132 TCTTTGTTACGA-ATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGT 17190 | ||| | ||| ||||| ||| || |||| ||||| || | ||| | ||| || || Sbjct 495693 TTCTTGCT-CGAGATCCAGTTCAGCGCCCAGTCGGCCTTCTTCTTCACGCACGGCAGTGT 495751 Query 17191 TTCTATGGCCTTAAATA 17207 ||| ||||| || |||| Sbjct 495752 TTCGATGGCATTGAATA 495768 Score = 105 bits (116), Expect = 7e-18 Identities = 118/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 || ||||| ||||| || || ||||| ||| ||| | ||| ||||| || ||||| Sbjct 495878 ATGTACGTGTCGATCAGGAGCGAATACATCTCGCTGTGGACGTTTTCCATCGCGATCTGG 495937 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353 |||||||| ||||| || ||||| | || || || ||| | ||| ||||| | ||| Sbjct 495938 AATCCGTAGAAGCAGCGCGCTTCGGTTACCTGCACCTCCTGGCTGAACCGTTCGACCAGA 495997 Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGC 17391 || ||||| ||||||||||| |||||||||||| || Sbjct 495998 TTCTCGTTAACGATGCCGTCCGACGCGGCGAAAAATGC 496035 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517536730562280