Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20atroparvus_20[genbank_20GCA_5F000473505.1_202013-09-30] 1,371 sequences; 224,290,125 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq3 89.7 5e-13 >seq3 Length=13649947 Score = 89.7 bits (98), Expect = 5e-13 Identities = 182/266 (68%), Gaps = 6/266 (2%) Strand=Plus/Plus Query 118930 TCGAATTTCATGTATCGTATCTTTCCAAATACGGTACGCTCCTTCCATGCTCTG-TCGTG 118988 ||| | |||||||||| ||| || || || | | ||||||||| || ||| ||||| Sbjct 8054822 TCGTAGTTCATGTATCTTATTTTACCGAAGATTTCTCTCTCCTTCCA-GCCCTGATCGTG 8054880 Query 118989 GAGTCCTGCTACTGCCCATAGACATCCCACGTATCCGTTGGGATCTGTTCCGTCTAACTC 119048 | || || | | ||| | || || ||||||||||| || || ||| || | Sbjct 8054881 AATGCCGGCGATCGACCACATGCAACCGACGTATCCGTTCGGGTCGCGTCCATCCAGGCT 8054940 Query 119049 GTACTTATCGTTTAAGTAGATACAGACGCTTAACGCACTT--TCCGGAGTCTTACTCCAT 119106 |||| ||||| | ||||| | || | || ||| || ||||| || |||| Sbjct 8054941 GTACCGGTCGTTGAGATAGATT--GCCGTCTCGAGCGCTTCCTCGGGAGTTTTGGTCCAC 8054998 Query 119107 TCCAGTAtttttttAGCCCAGTACATACGTAAATACCCGTGCATTTTACCCTCGTTAATC 119166 || ||||| || || ||||||||||| || | | |||||||| || ||||| || | | Sbjct 8054999 TCGAGTATCTTCTTCGCCCAGTACATGCGCAGGAAACCGTGCATCTTGCCCTCCTTCACC 8055058 Query 119167 ATCTGAAGTTGTGCGGTGTTCCATAG 119192 ||||| || || || | |||||| || Sbjct 8055059 ATCTGCAGCTGGGCCGAGTTCCACAG 8055084 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511405635635720