Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20atroparvus_20[genbank_20GCA_5F000473505.1_202013-09-30] 1,371 sequences; 224,290,125 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq8 123 2e-23 seq24 84.2 2e-11 seq7 84.2 2e-11 >seq8 Length=9380469 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | ||||||| ||| | || |||||||| |||||||| ||||| | | Sbjct 4936199 CCACCACGCAGGCGCAGCACCAGATGGAGGGTCGACTCCTTCTGAATGTTGTAGTCGGAC 4936140 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | | ||||||||||| ||||| || | || || | |||||||||| || Sbjct 4936139 AGCGTGCGCCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGCGGA 4936080 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| |||||| ||||| | ||| ||||| |||||| Sbjct 4936079 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACC 4936020 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTG 21179 || | |||||||||||| || || | |||||||| || || ||||| ||| Sbjct 4936019 TCAAGGGTAATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCATCTTG 4935969 >seq24 Length=2366404 Score = 84.2 bits (92), Expect = 2e-11 Identities = 123/173 (71%), Gaps = 1/173 (1%) Strand=Plus/Plus Query 29051 AAGTCGCGGCCCTTGACGAGCAGCACGTACTCGCAGCGGTCGTACCAGCGGGCGTGTTGC 29110 || ||| | || || | |||| ||| || | ||| | ||||||| || || || Sbjct 1871308 AACTCGGGTCCTTTCATGAGCTGCAGATAGTGACAGTTGCTGTACCAGATCGCATGCTGT 1871367 Query 29111 TGCCACGGCGCGTCGTCGGGTTCCCAATCCTTCAGACCGCCGTCGCAGCAAAAGCACCGC 29170 ||||||||| | ||||| | ||||| ||||||||||| ||| | |||| |||||| Sbjct 1871368 TGCCACGGCTCATCGTCCTGCTCCCAGTCCTTCAGACCACCGCCACAGCTGAAGCACTTG 1871427 Query 29171 GTCTTGTCGCCCTGGCCAGTGTAAAAGAATCCGGCCTCGGCCAACT-CTTCGG 29222 | ||||| || ||| ||||| ||||| ||||| ||| || || |||||| Sbjct 1871428 ACCCGGTCGCTCTTGCCGGTGTAGAAGAAGCCGGCATCGCTCAGCTGCTTCGG 1871480 >seq7 Length=10083987 Score = 84.2 bits (92), Expect = 2e-11 Identities = 115/161 (71%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 21019 CGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCT 21078 ||||||||||||||||||| || | || | | |||||||| | ||| | |||| Sbjct 5669267 CGTCCTCCAGCTGTTTGCCAGCGAAGATCATGCGCTGCTGGTTCGGGGGAATTTCTTCAC 5669326 Query 21079 TGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAA 21138 || |||||| | || || | || ||||| | ||||| || ||||||| || Sbjct 5669327 GCTCATCGATCTGCTTCTTGACACTTTCAACGGTATCCTCTGGCTCGGTGTCCACGGCAA 5669386 Query 21139 TGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTG 21179 |||||||||| |||||| |||| || || || ||||| ||| Sbjct 5669387 TGGTCTTGCCAGTTAACATTTTCACGAAGATCTGCATGTTG 5669427 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422252144444636