Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20atroparvus_20[genbank_20GCA_5F000473505.1_202013-09-30] 1,371 sequences; 224,290,125 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq28 102 2e-16 seq10 100 6e-16 >seq28 Length=1484777 Score = 102 bits (112), Expect = 2e-16 Identities = 225/332 (68%), Gaps = 4/332 (1%) Strand=Plus/Minus Query 35396 GGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGATACC 35455 || ||||| || || |||||||| || |||||||| || |||||||| | || | || Sbjct 598377 GGTGATTTAGGGCCAGTATACGGCTTTCAATGGCGCCACTTTGGTGCCAAGTACGGGACA 598318 Query 35456 TGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAATATACTAAAGACCCTG 35515 || ||||| | ||||| || | |||||| |||| | | | | | | Sbjct 598317 TGCCACGATGATTACAAGGGAAAAGGCAAAGATCAACTGGCTGAAGTGATCGATAAGATA 598258 Query 35516 AGAGAA-AATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCTTCA 35574 | |||| |||||| ||||| | ||||| |||||| | || |||||||| | || ||| Sbjct 598257 A-AGAACAATCCATATGATCGTAGGATCATTATGTCTGCCTGGAATCCGAGCGACATTCC 598199 Query 35575 CCTTATGGCTCTTCCTCCATGCCACATGACTG-CTCAATTTTATGTGGCTAATGGAGAAT 35633 ||||| || || || ||||| || || | || |||| ||| ||| | || || Sbjct 598198 GAACATGGCGCTACCCCCTTGCCAT-TGTTTGGCCCAGTTTTTTGTTGCTGACGGCGAGC 598140 Query 35634 TGTCGTGCCAGTTGTATCAGCGAAGCGGAGATGTCGGGTTGGGCGTGCCCTTCAATATTG 35693 |||| || ||| |||| || || | || || || ||||| || || |||||||||| Sbjct 598139 TGTCCTGTCAGATGTACCAACGGTCAGCCGACGTGGGTTTGGGTGTCCCTTTCAATATTG 598080 Query 35694 CATCATACTCTCTTCTGACTCATCTGATGGCC 35725 || ||||| | ||||| || |||| ||| Sbjct 598079 CAAGCTACTCCTTGCTGACACACATGATTGCC 598048 >seq10 Length=7496699 Score = 100 bits (110), Expect = 6e-16 Identities = 158/225 (70%), Gaps = 5/225 (2%) Strand=Plus/Minus Query 101855 AAGAAGAAGGAGCAGTGGGCTATTAATTGGATGCAAAGCAATAACGA----TTTGGCGGA 101910 |||||||||| | ||||| | || ||||| ||||| || | ||||||| | Sbjct 495736 AAGAAGAAGGCCGACTGGGCGCTGAACTGGATCTCGAGCAAGAAGGCCAACTTTGGCG-A 495678 Query 101911 ACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCAT 101970 | | ||||| ||||| || || || || ||||||||||| || ||||| |||| Sbjct 495677 GCGGGTGGTTGCGTTTGCCGCCGTCGAGGGCATCTTCTTTAGCGGGAGCTTCGCCGCCAT 495618 Query 101971 TTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTC 102030 ||||||| | ||||| |||| | |||| ||| | |||| ||| || ||| | ||||| Sbjct 495617 TTTCTGGCTGAAGAAGCGGGGCCTGATGCCGGGTTTGACCTTCTCGAACGAGCTGATTTC 495558 Query 102031 TAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAA 102075 | ||||| || || || |||||||||| || || |||| || Sbjct 495557 GCGCGACGAGGGCCTGCACTGCGACTTTGCCTGTCTGATGTTCAA 495513 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989566617029305