Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20atroparvus_20[genbank_20GCA_5F000473505.1_202013-09-30] 1,371 sequences; 224,290,125 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq4 100 2e-16 seq10 89.7 4e-13 >seq4 Length=12071184 Score = 100 bits (110), Expect = 2e-16 Identities = 116/154 (75%), Gaps = 2/154 (1%) Strand=Plus/Minus Query 33565 CGCATACCAGAGATGGGCGACAAGTTTGCATCGTTC-ACGGCCCAGAAGGGCACGTGCGG 33623 ||||| || |||| ||||||||||||||||| | |||| | ||||||| || ||||| Sbjct 2921237 CGCATCCCGCAGATCGGCGACAAGTTTGCATCCCGCCACGGTC-AGAAGGGTACCTGCGG 2921179 Query 33624 CATGATGTACGACCAGTGGGACATGCCGTTCACGGCCGACGGCGTGGTCCCGGACCTAGT 33683 ||| |||| |||| ||||||||||||||| ||| ||| | || || | | Sbjct 2921178 CATCCAGTACCGCCAGGAGGACATGCCGTTCACCTGCGAGGGCATCACGCCAGATATCAT 2921119 Query 33684 CATCAACCCGCATGCGTTCCCCTCGCGCATGACG 33717 |||||||||||| || |||| ||||| |||||| Sbjct 2921118 CATCAACCCGCACGCCATCCCGTCGCGTATGACG 2921085 >seq10 Length=7496699 Score = 89.7 bits (98), Expect = 4e-13 Identities = 111/152 (73%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTG 22809 || ||||| || || || ||| || | ||| ||| || || ||||| ||||||||| Sbjct 495667 GCGTTTGCCGCCGTCGAGGGCATCTTCTTTAGCGGGAGCTTCGCCGCCATTTTCTGGCTG 495608 Query 22810 AAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGAA 22869 ||||| || || ||||| || ||| | || || |||||| ||||| || ||||| Sbjct 495607 AAGAAGCGGGGCCTGATGCCGGGTTTGACCTTCTCGAACGAGCTGATTTCGCGCGACGAG 495548 Query 22870 GGTCTACACTGTGACTTTGCTTGTATGCTGTT 22901 || || ||||| |||||||| ||| || |||| Sbjct 495547 GGCCTGCACTGCGACTTTGCCTGTCTGATGTT 495516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356227647670513