Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20atroparvus_20[genbank_20GCA_5F000473505.1_202013-09-30] 1,371 sequences; 224,290,125 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq1 82.4 8e-11 >seq1 Length=20238125 Score = 82.4 bits (90), Expect = 8e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 139550 CGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAG 139609 ||||| || | ||| | ||||||||| || ||||| || || ||| | |||| Sbjct 19807239 CGCAACACCAGGTGGAGCGTAGACTCCTTCTGAATATTGTAGTCGGATAGCGTGCGGCCA 19807180 Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 || || | |||||| || || ||||||||||||| ||||| ||||| || || || || Sbjct 19807179 TCCTCCAACTGTTTGCCGGCGAAGATCAGACGTTGTTGATCTGGAGGAATTCCCTCCTTA 19807120 Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729 || ||| || || | | || | ||||| | ||||| ||||||| || | Sbjct 19807119 TCTTGGATCTTGGCCTTCACATTCTCGATCGTGTCCGACGGCTCGACCTCAAGCGTGATG 19807060 Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||||| || || | ||||| || || || ||||| Sbjct 19807059 GTCTTCCCAGTGAGGGTTTTCACAAAAATCTGCAT 19807025 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496055498703200