Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20atroparvus_20[genbank_20GCA_5F000473505.1_202013-09-30] 1,371 sequences; 224,290,125 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq19 279 7e-70 seq10 140 5e-28 >seq19 Length=3534686 Score = 279 bits (308), Expect = 7e-70 Identities = 1192/1858 (64%), Gaps = 38/1858 (2%) Strand=Plus/Minus Query 78738 TGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAGAA 78797 ||| || || || || || |||||||| ||||| || || || | |||| |||||||| Sbjct 2154461 TGCCGGCTTGGTGCGCAGGTAGTACATGCCCGTCTTCAGGCCCATCTTCCAGCCGTAGAA 2154402 Query 78798 ATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACT 78857 ||| || ||| || || |||| |||| || || | || || || | || || Sbjct 2154401 ATGAATCGACGTCAGCTTACCATAATTCGGCTCGGCCACGTGAATGTTGAACGACTGCGA 2154342 Query 78858 TTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTC 78917 || || ||||| || || | || || |||||||| || ||| || | |||||| Sbjct 2154341 CTGGTCAATGAACGCCCCACGATCGGCCGCCATTTTGATACACGTTTTCACCGAAATTTC 2154282 Query 78918 CCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGAAGGT--TTG-TATTCTGAATGG 78973 ||||| || || || || |||| | || | |||| | | | | ||||| |||| Sbjct 2154281 CCAAACCGTCTTGTACAAGTCGCGGATGTGCTGC-GGAATTTCCTCGATCTTCTGGATGG 2154223 Query 78974 ATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTCCATAATTTTCTCTCGGTTA 79033 | ||| | || | || | || || || || || | ||| | | || || | Sbjct 2154222 AACCATTGTGCGCGAGGATGTTGTTTTTCATTTCATCGTCCCACAGGCCTAAATCCGTCA 2154163 Query 79034 AAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGT 79093 | || | ||| |||| || || || || || || |||| || | |||| ||| Sbjct 2154162 GGTCCTGTAGCAAATGATGATTGACGACCTGGAACTCGCCCGACAGCACACGCCGATTGT 2154103 Query 79094 AAATATTACTGGTATATGGTTCCACCGATTCATTATTTCCCAAAATTTGAGCAGTTGATG 79153 | | || || || || || | ||| || || || ||||| || || || || || | Sbjct 2154102 AGACGTTCGAAGTGTACGGCTCGAACGACTCGTTGTTGCCCAAGATCTGCGCGGTGGAAG 2154043 Query 79154 CCGTTGGCATAGGTGCCACCAATAAACTATTT-CTAAGACCGTATGATCTG--ATTTTAT 79210 | || ||||| || |||| || || | | || | || || ||| | | || || | Sbjct 2154042 CGGTCGGCATCGGAGCCAACAG-AAGCGAGTTGCGAACGCC--ATGCTTGGCAATCTTTT 2153986 Query 79211 CTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAACATTCCAAAGATCATATTGTA 79270 | || || |||| | ||| || || | ||| ||||| | || || || | Sbjct 2153985 CCTTCAGCACACCCCAGTTCCACAGCTCGGTGGGGGTCTTGTTCCACATGTCGTACTGCA 2153926 Query 79271 GAATACCGTTACT-AGCGTATGATCCTGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCT 79329 | || || || || | || | ||| ||| || || || | || || |||| Sbjct 2153925 GCATCCCCTTGCTGACCGGACTGCCCTC-GTACGTCTCGTACGTGCCATCGCGGGCGGCC 2153867 Query 79330 AATTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGA 79389 | |||||||| ||||| || || ||||| || ||||||||||| || | | || || Sbjct 2153866 AGCTCACAACTGGCCTCCAAAGCGCCGTAGTAGATGGTTTCGAAGATTTGTTGGTTCAGC 2153807 Query 79390 TCTTGTGCTTCTAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCT 79449 | || || ||| || || | || || | ||||| ||||| || || | || Sbjct 2153806 TTCTGCGCCTCTTCACTCTCGTACGGGTAGCGCATCAGAATGAACGCATCGGCCATGCCC 2153747 Query 79450 TGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGA 79509 || || || |||||||| || || || | | | || || | ||||| || | || Sbjct 2153746 TGCACGCCGATACCGATCGGCCTGTGGCGCATGTTGGAGCGCTTCGCTTCCGGCACCGGG 2153687 Query 79510 TAATAATTAATATCTATAATTTTATTGAGATTCC---TGACTATTACTTTGACCACATCC 79566 || || ||||| || || ||||| || || || | |||| | ||| | || ||| Sbjct 2153686 TAGTAGTTAATGTCGATGATTTTGTTCAGGTTGCGCGTGACAGTC---TTGGCGACTTCC 2153630 Query 79567 TTTAGTTTGAGAAAATCAAA----TCGTCCATCTATTACAAACATGTTCAACGCGACAGA 79622 || ||||| |||||| | | |||| || | || |||||||||| ||||| || Sbjct 2153629 TTCAGTTTCGCAAAATCGTACGTGTGGTCCGGCT-TCACGAACATGTTCAGCGCGATTGA 2153571 Query 79623 TGCCAGATTACAAACGGCTACCTCAT--TAGCATCCGCATATTGTATTATTTCAGTGCAG 79680 ||||||||| || || |||| |||| | | | || || | | ||||| ||||| Sbjct 2153570 TGCCAGATTGCAGACCGCTATTTCATCCTTGGA--CGAGTACTCGACGATTTCCGTGCAC 2153513 Query 79681 AGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 79740 ||||| ||||| || || || | || ||||| || ||||| || ||||||||| Sbjct 2153512 AGGTTTGAGCACTTGATTGTGCCCACGTTCTGTTGGTTGCTCTTGCGATTGCACGCATCC 2153453 Query 79741 TTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACG 79800 || || || ||| |||| || || || | ||| ||||| || || || ||| | Sbjct 2153452 TTGTACAGCATGTACGGGACGCCCGTCTCGACCTGCGATTCGATGATGGCAAACCACAGA 2153393 Query 79801 ACTCGAGCCTTTATTATAGACTTGTATCTCTTTTCTCTTTC--GTATTGTGTATATAATC 79858 | ||||||| | ||| || | ||| ||| ||| ||| || | Sbjct 2153392 TCCTGAGCCTTGACCT--GACGGATAAACCGGCCCTCCTTCTCGTAGCCTGTGTAGAGCT 2153335 Query 79859 GTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACG 79918 ||| ||||| |||||||| ||| | ||| ||||| |||| || |||||||| Sbjct 2153334 TTTCAAACTCCTCTCCCCACGAATCCGACAGTCCGGGACAATCGTGCGGGCACATCAAGC 2153275 Query 79919 ACCAC-TCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA 79977 |||| |||| || ||| || || | ||| || ||||| || | ||| || || Sbjct 2153274 TCCACATCTCGTTCG-CCTCGACGCGCTGCATGAACAGATCCGGCACCCAGAGGGCGTAG 2153216 Query 79978 AATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCC 80037 || | || | | | |||||| || || || ||||| || |||||||| ||| | Sbjct 2153215 AACATGTCGCGCGCGCGGACCTCCTCCTTGCCGGTGTTCTTCTTCAGATCGAGAAACTCG 2153156 Query 80038 ATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCT 80097 | | ||| |||||||| || | ||| || || | | || || || ||||| || Sbjct 2153155 AACACATCGCCGTGCCACGGCTCGAGGTAGATCGCGAACGCACCGGGGCGCTTGTTGCCG 2153096 Query 80098 CCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTG 80157 ||||| || | || | |||||||| || || || | || ||| || | | || ||| Sbjct 2153095 CCCTGGTCGACATAGCGCGCGGTGTTGTTGTAGACGCGCAGCATCGGCACCAGCCCGTTG 2153036 Query 80158 GATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATA 80215 || | || || || || | ||| || |||| | ||||| || | | ||| | | Sbjct 2153035 GAAATTCCGTTCGTGCCTGCGATGTACGTTCCCTTCGCACGGATGCAGTGGACATTCA-A 2152977 Query 80216 GACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGC 80275 | || || || || ||| || || || | ||||| | || ||||| || || |||| Sbjct 2152976 G-CCAATGCCTCCGGCCGACTTCGAAATCAGCGCGCACTGCTTCAACGTGTCGTAAATGC 2152918 Query 80276 CCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAG 80335 |||| ||||| || || ||| | || ||||| ||| ||| | || |||| | Sbjct 2152917 CCTCGATGCTGTCGTCCGACATCGTCAGCAGAAAGCAGGAAGAAAGCTGCGGACGTTGTG 2152858 Query 80336 TTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGT 80395 | | || ||| || ||||| || || |||||||| | || || |||||||| | Sbjct 2152857 TCGCAGCCGCAAACAATGTAGGCGACGCATGCGTAAAGTAACGCTCCGAGAGTAGATTAT 2152798 Query 80396 ACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACA 80455 | ||||| || || | || |||||| ||||| || | || || ||||| | || Sbjct 2152797 AGGTCTCTATGGCCGCATCGATATCCTCGCCGTGAATGCCGATGGCTACGCGCATCAGCA 2152738 Query 80456 TGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAG 80515 | ||||| |||| |||||||||||| || || |||| || ||| || ||||| | Sbjct 2152737 TATGCTGCGGTCGCTCAACGATCTTGCCCTTGATCTTCAGCAGGTACGACCGTTCCAGCG 2152678 Query 80516 TTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 80573 |||| || |||||||| ||||| || || || || || || || | ||||| || Sbjct 2152677 TTTTGAAGCCAAAATAATTGTAGCCGAAATCGCGATCATATATGATGGCAGAGTTCAG 2152620 >seq10 Length=7496699 Score = 140 bits (154), Expect = 5e-28 Identities = 188/259 (73%), Gaps = 7/259 (3%) Strand=Plus/Plus Query 49948 TTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTG 50007 || ||||||| ||| || || ||||||||||| |||||||| | ||| || ||||| Sbjct 495513 TTGAACATCAGACAGGCAAAGTCGCAGTGCAGGCCCTCGTCGCGCGAAATCAGCTCGTTC 495572 Query 50008 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGAC 50067 || || || | || ||||| ||||| ||||| || ||||| || |||| || || | Sbjct 495573 GAGAAGGTCAAACCCGGCATCAGGCCCCGCTTCTTCAGCCAGAAAATGGCGGCGAAGCTC 495632 Query 50068 CCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCG 50127 || ||||||||| || || || |||||||| ||||| | | ||| ||| | |||| Sbjct 495633 CCGCTAAAGAAGATGCCCTCGACGGCGGCAAACGCAACCACCCGCTCGCCAAAGTTGGC- 495691 Query 50128 CTGTCATG-----TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCG 50182 || || || ||||| || | ||||| ||||||||||| || || || |||| | Sbjct 495692 CT-TCTTGCTCGAGATCCAGTTCAGCGCCCAGTCGGCCTTCTTCTTCACGCACGGCAGTG 495750 Query 50183 TTTCTATGGCATTAAAGAG 50201 |||| |||||||| || || Sbjct 495751 TTTCGATGGCATTGAATAG 495769 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718256490668440