Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20atroparvus_20[genbank_20GCA_5F000473505.1_202013-09-30] 1,371 sequences; 224,290,125 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq1 98.7 8e-16 >seq1 Length=20238125 Score = 98.7 bits (108), Expect = 8e-16 Identities = 164/236 (69%), Gaps = 1/236 (0%) Strand=Plus/Minus Query 42880 TCGCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCG 42939 || || ||||| |||| ||||||| |||| || |||||| || | |||||| ||| Sbjct 19807254 TCACCACCACGAAGTCGCAACACCAGGTGGAGCGTAGACTCCTTCTGAATATTGTAGTCG 19807195 Query 42940 GACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCC 42999 || | || || | || ||||| ||||||||||| || |||| || |||||||| | Sbjct 19807194 GATAGCGTGCGGCCATCCTCCAACTGTTTGCCGGCGAAGATCAGACGTTGTTGATCTGGA 19807135 Query 43000 GGCACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCG 43059 || | || || || || |||| | || || | | | ||||| | |||| Sbjct 19807134 GGAATTCCCTCCTTATCTTGGATCTTGGCCTTCACATTCTCGATCGTGTCCGACGGCTCG 19807075 Query 43060 ACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT-TTTCT 43114 || || | ||| || || || || || || |||||||||||||| ||||| ||||| Sbjct 19807074 ACCTCAAGCGTGATGGTCTTCCCAGTGAGGGTTTTCACAAAAATCTGCATCTTTCT 19807019 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381363227671518