Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20atroparvus_20[genbank_20GCA_5F000473505.1_202013-09-30] 1,371 sequences; 224,290,125 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq83 134 2e-26 >seq83 Length=112245 Score = 134 bits (148), Expect = 2e-26 Identities = 220/313 (70%), Gaps = 8/313 (3%) Strand=Plus/Minus Query 164393 ATTGGAATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCA 164452 ||||| |||||| | ||||||| | || ||||| ||||| ||||| | || || Sbjct 80154 ATTGGGATTTTGGACGAATGGGAATCGGCGGACTGGATCGCGAATTCAATGCAATCTTTC 80095 Query 164453 GACGAGCATTTGCTTCTAGATCAGTTCCTATCGAAATAATaaaaaaaTTAGGCTGTAAAC 164512 | || || ||||| ||| | |||| ||| || | || || |||| || || | Sbjct 80094 GTCGTGCTTTTGCCTCTCGTGTCTTTCCGCCTGAAGTAGTTGAACAACTAGGTTGCAAGC 80035 Query 164513 ATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGAT 164572 || | ||||||||||| | |||||||||| ||| ||| |||||||| ||||| || Sbjct 80034 ATGTGAAAGGAATTTTGCTGTATGGACCTCCCGGTACCGGAAAAACATTGATGGCACGTC 79975 Query 164573 GCATTGCT-CAAGCTTTTAAATC---GCGACCCGTTAAAATTGTTAATGGTCCTGAATTA 164628 |||| | ||| | || ||| | || ||| ||||||||||||||||| | | Sbjct 79974 AGATTGGTACAA--TGTTGAATGCAAGAGAACCG--AAAATTGTTAATGGTCCCCAGATT 79919 Query 164629 TTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAA 164688 ||| | || |||||||| || |||||||||||||| | | || ||| || |||||| Sbjct 79918 TTGGATAAGTATGTAGGAGAATCAGAAGCTAATGTACGCAGATTATTTGCTGATGCTGAA 79859 Query 164689 GAAGAACAAAAGA 164701 || ||| |||||| Sbjct 79858 GAGGAAGAAAAGA 79846 Score = 86.0 bits (94), Expect = 7e-12 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 164783 TTCATGATGCAGTGGTTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATA 164842 |||||||| | || || ||||| ||| | | ||||| ||||| ||||| ||||||| Sbjct 79682 TTCATGATACTGTTGTAAATCAATTGTTGGCCAAAATCGATGGCGTAGAGCAATTAAATA 79623 Query 164843 ATATTTTAATTGTAGGTATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGAC 164902 ||||||| | | |||||||| ||| ||| ||| | ||||| || || || | |||| Sbjct 79622 ATATTTTGGTAATCGGTATGACTAACAGACGAGATATGATTGACGAAGCATTGATGCGAC 79563 Query 164903 CTGGTCGATTAGAATTGAAAATAGAAATAGGATTACCCGACAAAGAAGGACGCCTTCAAA 164962 | || | | ||| | | || ||||| | ||||| | ||||||| || | |||| Sbjct 79562 CGGGCAGGCTGGAAGTTCAGATGGAAATCAGCCTACCCAATGAAGAAGGTCGTGTACAAA 79503 Query 164963 TT 164964 || Sbjct 79502 TT 79501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595861788243600