Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20atroparvus_20[genbank_20GCA_5F000473505.1_202013-09-30] 1,371 sequences; 224,290,125 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq15 96.9 2e-15 >seq15 Length=4495915 Score = 96.9 bits (106), Expect = 2e-15 Identities = 198/292 (68%), Gaps = 7/292 (2%) Strand=Plus/Plus Query 3854 ATGAAAGATACCGAAGGAAAAGGTGTACATTTTATGATGGCTGACGGTGGGTTCTCGGTT 3913 |||| | | |||||| | ||| |||||| | |||||||| || || || ||||| || Sbjct 19529 ATGACACAAACCGAA---ACAGGAGTACATGTGATGATGGCAGATGGCGGCTTCTCTGTC 19585 Query 3914 GAGGGTCAAGAAAATATGCAAGAAATGTTATCGAAAAAGATGTATTTGTGTCAATGTTTA 3973 || || ||||| ||| ||||||| || | || || || | || || || || | || Sbjct 19586 GAAGGACAAGAGAATCTGCAAGAGATACTTTCCAAGCAGCTCTACTTATGCCAGATTATA 19645 Query 3974 ATTGCATTGATGATCATACGAATTGGTGGTCATTGTGTTATCAAATTTTTCGATATATTT 4033 | || | ||| | || | | ||| ||| || || ||||| || ||| ||||| Sbjct 19646 GTAGCTCTCGCGATTGTGCGCACCGATGGAAATTTCGTGATGAAATTCTTTGATTTATTT 19705 Query 4034 ACACCTTTTAGTGCTGGTTTAGTGTATTTGATGTATAGATCTTTTAATCGTATTTGTATT 4093 || || || |||||||| || | ||| | |||| || |||| | |||| ||| Sbjct 19706 ACCCCATTCAGTGCTGGACTATTATATCTAGCATATAAATGCTTTAGGCAAATTTCTATC 19765 Query 4094 TTCAAACCACATTCATCG--CGACCGGCCAATTCTGAAAGATATTTGGTGTG 4143 | ||||||| | || | || || ||||||||||| ||||||| || || Sbjct 19766 TGCAAACCAAA--CAGCAGTCGTCCAGCCAATTCTGAGCGATATTTAGTCTG 19815 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 276548979048613