Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20atroparvus_20[genbank_20GCA_5F000473505.1_202013-09-30] 1,371 sequences; 224,290,125 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq19 369 3e-97 seq8 172 5e-38 seq10 123 2e-23 seq2 89.7 5e-13 seq1 86.0 6e-12 >seq19 Length=3534686 Score = 369 bits (408), Expect = 3e-97 Identities = 1192/1826 (65%), Gaps = 42/1826 (2%) Strand=Plus/Minus Query 144740 GCTGGCTTGGTGCGCAAATAGTACATGCCCGTTTTGAGTCCCGAGCGCCAAGTGTAGTCG 144799 || ||||||||||||| |||||||||||||| || || ||| ||| |||| Sbjct 2154460 GCCGGCTTGGTGCGCAGGTAGTACATGCCCGTCTTCAGGCCCATCTTCCAGCCGTAGAAA 2154401 Query 144800 TGTATCGACGTCATCAGAGCGTACGTGGGCTCCGCCACAAACAAATTTAGCGATTGGCTT 144859 || |||||||||| | | | || | ||||| ||||| | || | ||| || Sbjct 2154400 TGAATCGACGTCAGCTTACCATAATTCGGCTCGGCCACGTGAATGTTGAACGACTGCGAC 2154341 Query 144860 TGATCAATGAAAGCGTTGCGGTCGGCGGCCATCTCAATCATACGTTTGCATTTCA-TTTC 144918 || |||||||| || || ||||| ||||| | || | |||||| || | |||| Sbjct 2154340 TGGTCAATGAACGCCCCACGATCGGCCGCCATTTTGAT-ACACGTTTTCACCGAAATTTC 2154282 Query 144919 CCAAGCGGTCTTGTACAAACGTTTAATGTGGTCCGGAATGCCGTCAATCGCCTGAATCGA 144978 |||| | ||||||||||| ||||| | |||||| | || ||| ||| || || Sbjct 2154281 CCAAACCGTCTTGTACAAGTCGCGGATGTGCTGCGGAATTTCCTCGATCTTCTGGATGGA 2154222 Query 144979 CCCCTTGTGCGCAAATATGGCGTTCCGCATTTCGGACGTGT-ACAGTTTTAACTTGATCA 145037 || |||||||| | ||| ||| |||||| ||| |||| ||| | ||| Sbjct 2154221 ACCATTGTGCGCGAGGATGTTGTTTTTCATTTCAT-CGTCCCACAGGCCTAAATCCGTCA 2154163 Query 145038 AGTCGTCAATTAAGTACTGATTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAAT 145097 ||| | | || | |||||||||||||| |||||||| | || |||||| || | Sbjct 2154162 GGTCCTGTAGCAAATGATGATTGACGACCTGGAACTCGCCCGACAGCACACGCCGATTGT 2154103 Query 145098 ACACGTTAGACGTGAAGGGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTG 145157 | ||||| || ||| | || || || |||||||| ||||||| ||| || ||||| | | Sbjct 2154102 AGACGTTCGAAGTGTACGGCTCGAACGACTCGTTGTTGCCCAAGATCTGCGCGGTGGAAG 2154043 Query 145158 CGGTGGGCATGTACGCCACCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCT 145217 |||| ||||| |||| || | || ||||| | ||| ||||| || | ||||| Sbjct 2154042 CGGTCGGCATCGGAGCCAACAGAAGCGAGTTGCGAACGCCATGCTTGGCAATCTTTTCCT 2153983 Query 145218 TTAGCGTACCCCAATCCCATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAA 145277 | ||| |||||| | ||| ||| || || || || ||||||||||||||||| | Sbjct 2153982 TCAGCACACCCCAGTTCCACAGCTCGGTGGGGGTCTTGTTCCACATGTCGTACTGCAGCA 2153923 Query 145278 TGCCCTCGCTGGCGGGGCTGCCTTGAAAGGAACTGTAACTGCCCCAAGTTTTGGCGAGCT 145337 | |||| |||| | || ||||| | | | ||| |||| ||| |||| Sbjct 2153922 TCCCCTTGCTGACCGGACTGCCCTCGTACGTCTCGTACGTGCCATCGCGGGCGGCCAGCT 2153863 Query 145338 CGCAACTCGCCTCCAGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCA 145397 | ||||| ||||||| ||||||| | || || || ||| ||||| ||| ||| | Sbjct 2153862 CACAACTGGCCTCCAAAGCGCCGTAGTAGATGGTTTCGAAGATTTGTTGGTTCAGCTTCT 2153803 Query 145398 TCGCTTCATCGCTCTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTA 145457 ||| || || ||||||||||| ||||| ||| | || |||||||| | ||||| | Sbjct 2153802 GCGCCTCTTCACTCTCGTACGGGTAGCGCATCAGAATGAACGCATCGGCCATGCCCTGCA 2153743 Query 145458 TTCCCACGCCGATGGGCCGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATC 145517 || | ||||| |||| || ||||||| | |||| | | || || Sbjct 2153742 CGCCGATACCGATCGGCCTGTGGCGCATGTTGGAGCGCTTCGCTTCCGGCACCGGGTAGT 2153683 Query 145518 GATTACGGTCGATAATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACT 145577 ||| |||||| ||||| |||| ||| ||| || ||| | | | | || | Sbjct 2153682 AGTTAATGTCGATGATTTTGTTCAGGTTGCGCGTGACAGTCTTGGCGACTTCCTTCAGTT 2153623 Query 145578 TTTCAAAGTCAAACCGAGCCTCGTCAACGAC--CACACAGCTATTGACGGCGATCGACGC 145635 | |||| || || | | ||| || | ||| | | || | ||||| || || Sbjct 2153622 TCGCAAAATCGTAC---GTGTGGTC--CGGCTTCACGAACATGTTCAGCGCGATTGATGC 2153568 Query 145636 CAAATTACAAACTGCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATT 145695 || ||| || || || | || || | ||| | ||||| || | ||||| || Sbjct 2153567 CAGATTGCAGACCGCTATTTCATCCTTGGACGAGTACTCGACGATTTCCGTGCACAGGTT 2153508 Query 145696 GCTACATTTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTA 145755 || ||||| || |||| || || || || || || | |||||||| |||||||| Sbjct 2153507 TGAGCACTTGATTGTGCCCACGTTCTGTTGGTTGCTCTTGCGATTGCACGCATCCTTGTA 2153448 Query 145756 GAGCATGTACGGTCCGCCAGTCTCCACCTGCGTCTCCACGAT--AAAACGGTGCAAGTCC 145813 ||||||||||| |||| ||||| ||||||| || | ||| |||| || ||| Sbjct 2153447 CAGCATGTACGGGACGCCCGTCTCGACCTGCGATTCGATGATGGCAAAC--CACAGATCC 2153390 Query 145814 TGCGCACGCACCTGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCA 145873 || || ||||| | | |||||||| | ||||| ||||||||| ||| Sbjct 2153389 TGAGCCTTGACCTGACGGATAAACCGGCCCTCCTTCTCGTAGCCTGTGTAGAGCTTTTCA 2153330 Query 145874 AACGCGGAACCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCAT 145933 ||| | || | |||| ||||| |||||||| | || || ||||||| ||| Sbjct 2153329 AACTCCTCTCCCCACGAATCCGACAGTCCGGGACAATCGTGCGGGCACATCAAGCTCCAC 2153270 Query 145934 ACGCCGTTGGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAG 145993 | |||| || | |||||||| ||| |||| ||| |||||||| || ||||| | || | Sbjct 2153269 ATCTCGTTCGCCTCGACGCGCTGCATGAACAGATCCGGCACCCAGAGGGCGTAGAACATG 2153210 Query 145994 TCGCGCGCTTTGCAATCCTCAGCACCCATGTTTCGCTTCAAATTAAGCACACT-ATAGAT 146052 |||||||| | ||||| || |||| ||||| || || | ||| | | Sbjct 2153209 TCGCGCGCGCGGACCTCCTCCTTGCCGGTGTTCTTCTTCAGATCGAG-AAACTCGAACAC 2153151 Query 146053 GTCCGCGTGCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCCTG 146109 || |||||||||| || | |||| |||| || || || ||||| ||||| Sbjct 2153150 ATCGCCGTGCCACGGCTCGAGGTAGATCGCGAACGCACCGGGGCGCTTGTTGCCGCCCTG 2153091 Query 146110 GTCCACGTGACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTAC 146169 ||| || | || | ||||||| ||||||||| ||| ||| | | ||| ||| | Sbjct 2153090 GTCGACATAGCGCGCGGTGTTGTTGTAGACGCGCAGCATCGGCACCAGCCCGTTGGAAAT 2153031 Query 146170 GCCGTTCGTAGAGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAG 146229 |||||||| || || || | || | ||| || ||||||| ||| | Sbjct 2153030 TCCGTTCGTGCCTGCGATGTACGTTCCCTTCGCACGGATGCAGTGGACATTCAAGCCAAT 2152971 Query 146230 ACCGCCGCCGTACTTGGATAT-AGCGGCGCAGTCGCCGAGCGTCTCGTAGATGCCGTCAA 146288 || ||| | |||| || || ||| ||||| | | ||| ||||| ||||| || | Sbjct 2152970 GCCTCCGGCCGACTTCGAAATCAGC-GCGCACTGCTTCAACGTGTCGTAAATGCCCTCGA 2152912 Query 146289 TGCTATCGCTTCGA-ATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCC 146347 |||| ||| | ||| || ||||||||||| || | | ||||| | ||| | Sbjct 2152911 TGCTGTCG-TCCGACATCGTCAGCAGAAAGCAGGAAGAAAGCTGCGGACGTTGTGTCGCA 2152853 Query 146348 GCCGAGAACAACGTCGGGCTCGCGTGCGTAAACATTTTTCGGCTC----ATCATCCGATA 146403 |||| ||||| || || ||| |||||||| | |||| | | ||| Sbjct 2152852 GCCGCAAACAATGTAGGCGACGCATGCGTAAA----GTAACGCTCCGAGAGTAGATTATA 2152797 Query 146404 CGTTTCGATAGCGTCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCAT 146463 || || || || | | || || ||||| |||||||| | || |||||||| ||||| Sbjct 2152796 GGTCTCTATGGCCGCATCGATATCCTCGCCGTGAATGCCGATGGCTACGCGCATCAGCAT 2152737 Query 146464 GTGTTGGGGCCGCTCCGCCA-CTTG--ATTGTCAATCTTTAACAAATA--GCCGTTCTCC 146518 || || || ||||| | | |||| ||| ||||| | || || |||| ||| Sbjct 2152736 ATGCTGCGGTCGCTCAACGATCTTGCCCTTG---ATCTTCAGCAGGTACGACCGT--TCC 2152682 Query 146519 AGGGTTTTGTATCCGAAAAATTTGTA 146544 || |||||| | || ||| | ||||| Sbjct 2152681 AGCGTTTTGAAGCCAAAATAATTGTA 2152656 >seq8 Length=9380469 Score = 172 bits (190), Expect = 5e-38 Identities = 175/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| |||| |||||||| | ||| | |||||||||||| ||||||||||| ||| Sbjct 4936200 GCCACCACGCAGGCGCAGCACCAGATGGAGGGTCGACTCCTTCTGAATGTTGTAGTCGGA 4936141 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || |||||| ||||| ||||||||||| ||| |||| | ||||||||||||||| || Sbjct 4936140 CAGCGTGCGCCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGCGG 4936081 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || ||||| ||| ||| ||| | | ||| | ||||| | || ||||| Sbjct 4936080 AATGCCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGAC 4936021 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||||| ||| ||||| || || ||||| ||||| |||||||| Sbjct 4936020 CTCAAGGGTAATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 4935973 >seq10 Length=7496699 Score = 123 bits (136), Expect = 2e-23 Identities = 163/226 (72%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 46085 TGCCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCGA 46144 ||||||||||| ||||| ||||||||||| |||| |||||| |||| | || | Sbjct 495747 TGCCGTGCGTGAAGAAGAAGGCCGACTGGGCGCTGAACTGGATCTCGAGCAAGAAGGCCA 495688 Query 46145 CTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTT 46204 || | |||||| |||| || ||||| || |||||| |||| ||| || || | Sbjct 495687 ACTTTGGCGAGCGGGTGGTTGCGTTTGCCGCCGTCGAGGGCATCTTCTTTAGCGGGAGCT 495628 Query 46205 TTGCCGCCATCTTTTACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACG 46264 | |||||||| || | | || | |||| | ||||| || |||| || |||| Sbjct 495627 TCGCCGCCATTTTCTGGCTGAAGAAGCGGGGCCTGATGCCGGGTTTGACCTTCTCGAACG 495568 Query 46265 AGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCT 46310 ||||||| |||||||||||||||||||| |||||||| ||||| Sbjct 495567 AGCTGATTTCGCGCGACGAGGGCCTGCACTGCGACTTTGCCTGTCT 495522 >seq2 Length=16623535 Score = 89.7 bits (98), Expect = 5e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||| || || || || | ||| |||||||| || |||||||| ||| | Sbjct 2043752 CCGCCACGAAGACGAAGAACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 2043693 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || |||||| |||||||| || ||| |||| ||||||||||| || || || Sbjct 2043692 AGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATCAAACGCTGCTGATCTGGGGGA 2043633 Query 131128 ATTCCTTCTTTGTC 131141 || || || ||||| Sbjct 2043632 ATACCCTCCTTGTC 2043619 >seq1 Length=20238125 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | |||| ||| | || | || |||||||| ||||| ||||| ||| Sbjct 19807251 CCACCACGAAGTCGCAACACCAGGTGGAGCGTAGACTCCTTCTGAATATTGTAGTCGGAT 19807192 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| | ||| ||||| ||| |||| | ||| || || || ||||| Sbjct 19807191 AGCGTGCGGCCATCCTCCAACTGTTTGCCGGCGAAGATCAGACGTTGTTGATCTGGAGGA 19807132 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||| || || || ||| || ||| | | ||| | || || | | ||||| Sbjct 19807131 ATTCCCTCCTTATCTTGGATCTTGGCCTTCACATTCTCGATCGTGTCCGACGGCTCGACC 19807072 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || || || || ||||| || ||||||||||| Sbjct 19807071 TCAAGCGTGATGGTCTTCCCAGTGAGGGTTTTCACAAAAATCTGCAT 19807025 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472004710880640