Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20atroparvus_20[genbank_20GCA_5F000473505.1_202013-09-30] 1,371 sequences; 224,290,125 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq8 96.9 3e-15 seq1 84.2 2e-11 >seq8 Length=9380469 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || | ||| |||| ||| || || |||||||| || ||||||||||||| | Sbjct 4936199 CCACCACGCAGGCGCAGCACCAGATGGAGGGTCGACTCCTTCTGAATGTTGTAGTCGGAC 4936140 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | ||||||| || ||||| || | || || ||||| |||||| || Sbjct 4936139 AGCGTGCGCCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGCGGA 4936080 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | |||||| ||||| || | | |||||| | | | || || |||||| Sbjct 4936079 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCGATCGTATCCGAGGGCTCGACC 4936020 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939 || | ||| ||||| || || || || |||||||| || |||||||| ||| Sbjct 4936019 TCAAGGGTAATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCATCTTG 4935969 >seq1 Length=20238125 Score = 84.2 bits (92), Expect = 2e-11 Identities = 159/232 (69%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || | || |||| || ||||| |||||||| || || |||||||||| Sbjct 19807251 CCACCACGAAGTCGCAACACCAGGTGGAGCGTAGACTCCTTCTGAATATTGTAGTCGGAT 19807192 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | | |||||||| |||||||| || | || || || ||||| || ||| Sbjct 19807191 AGCGTGCGGCCATCCTCCAACTGTTTGCCGGCGAAGATCAGACGTTGTTGATCTGGAGGA 19807132 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||| || || || || || |||||| | | | ||||| ||||| Sbjct 19807131 ATTCCCTCCTTATCTTGGATCTTGGC--CTTCACATTCTCGATCGTGTCCGACGGCTCGA 19807074 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTT 16938 || | |||||||| || || || || ||||| |||||||||||||| || Sbjct 19807073 CCTCAAGCGTGATGGTCTTCCCAGTGAGGGTTTTCACAAAAATCTGCATCTT 19807022 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405081231359290