Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20atroparvus_20[genbank_20GCA_5F000473505.1_202013-09-30] 1,371 sequences; 224,290,125 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq273 96.9 7e-15 seq12 95.1 2e-14 seq230 91.5 3e-13 seq24 91.5 3e-13 seq11 91.5 3e-13 seq10 91.5 3e-13 seq5 91.5 3e-13 seq4 91.5 3e-13 seq1 91.5 3e-13 seq29 89.7 1e-12 seq2 86.0 1e-11 >seq273 Length=17413 Score = 96.9 bits (106), Expect = 7e-15 Identities = 68/78 (87%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 10860 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 10919 Query 142563 CCCCACATCGGGCAGAAG 142580 |||||| | |||| |||| Sbjct 10920 CCCCACGTTGGGCGGAAG 10937 >seq12 Length=8157176 Score = 95.1 bits (104), Expect = 2e-14 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560 ||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct 769288 ATAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCG 769229 Query 142561 AGCCCCACATCGGGC 142575 |||||||| | |||| Sbjct 769228 AGCCCCACGTTGGGC 769214 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 765116 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 765057 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 765056 CCCCACGTTGGGC 765044 >seq230 Length=17829 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 14845 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 14904 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 14905 CCCCACGTTGGGC 14917 >seq24 Length=2366404 Score = 91.5 bits (100), Expect = 3e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 1518392 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 1518333 Query 142564 CCCACATCGGGCAGA 142578 ||||| | |||| || Sbjct 1518332 CCCACGTTGGGCGGA 1518318 >seq11 Length=7594930 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 3990743 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 3990684 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 3990683 CCCCACGTTGGGC 3990671 >seq10 Length=7496699 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 4960966 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 4961025 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 4961026 CCCCACGTTGGGC 4961038 >seq5 Length=11808074 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 5628387 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 5628328 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 5628327 CCCCACGTTGGGC 5628315 >seq4 Length=12071184 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 2295499 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 2295558 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 2295559 CCCCACGTTGGGC 2295571 >seq1 Length=20238125 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 485911 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 485852 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 485851 CCCCACGTTGGGC 485839 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 517464 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 517523 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 517524 CCCCACGTTGGGC 517536 Score = 91.5 bits (100), Expect = 3e-13 Identities = 67/77 (87%), Gaps = 1/77 (1%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 5163946 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 5163887 Query 142564 CCCACATCGGGC-AGAA 142579 ||||| | |||| |||| Sbjct 5163886 CCCACGTTGGGCGAGAA 5163870 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 16217186 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 16217245 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 16217246 CCCCACGTTGGGC 16217258 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 5167371 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 5167430 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 5167431 CCCACGTTGGGC 5167442 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 13241832 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 13241891 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 13241892 CCCACGTTGGGC 13241903 Score = 86.0 bits (94), Expect = 1e-11 Identities = 293/449 (65%), Gaps = 12/449 (3%) Strand=Plus/Minus Query 218565 GCGTTCTATTCCCAGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGC 218624 ||| || || || || || | || || |||||||| ||||| ||| | || || | Sbjct 2775846 GCGCTCGATCCCGTGCATGCTCGACGGGCTCAAGCCGGGCCAGCGGAAGGTGCTGTTCAC 2775787 Query 218625 C-GCATTCAAGCGGAACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTAT 218683 | |||| |||||| ||| | || | ||||| || ||| | | |||| || Sbjct 2775786 CTGCAT-CAAGCGTAACGACAAGCGCGAGGTGAAGGTGGCCCAGCTGGCCGGTTCGGTCG 2775728 Query 218684 CCGAAATTTCTGGCTACCATCACGGTGAGCAGAGTCTGCAGGGTGCCATTGTAGGCATGG 218743 | ||||| || | ||| || ||||| ||| | ||| || | || | | ||| Sbjct 2775727 CGGAAATGTCCGCCTATCACCACGGCGAGGCGTCGCTGTGCGGCACGATCATCAACCTGG 2775668 Query 218744 CACAGGACTATGTGGGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTGGTT 218803 | ||| | ||||| |||||||||||||| ||| ||||| ||| ||||||||| ||| Sbjct 2775667 CGCAGAATTATGTCGGCAGTAACAACATCAACCTGCTGTACCCGGGCGGTCAGTTCGGTA 2775608 Query 218804 CTCGTCTATTGGGTGGAAAGGATAGTGCTTCTGCC--AGGTATATCTTTACAAAGTTGTC 218861 | || | ||||| |||||||| || | ||| | || ||||| || | | |||| Sbjct 2775607 CGCGGTTGACCGGTGGCAAGGATAGCGC--CAGCCCGCGTTACATCTTCACGATGATGTC 2775550 Query 218862 GCCCGTGACGCGCCAGGTGTTCAATCAGGCCGATGATGTGCTCCTTAAGTATCTTGAGGA 218921 | || | ||||| || | ||| | | | ||| ||| ||| || |||| | || | Sbjct 2775549 GGCCCTCACGCGGCACATCTTCCACCCGCTCGACGATCCGCTACTGGAGTACC---AGTA 2775493 Query 218922 CGATG--GTTCTTCG-ATTGAGCCCGAGTGGTATGTGCCTGCTATTCCGTTTTTGCTCGT 218978 ||| | || || || ||||| | ||||| |||| || ||| | | || || Sbjct 2775492 CGAGGACAATCAGCGCATCGAGCCGGTCTGGTACCTGCCGATCATCCCGATGCTACTGGT 2775433 Query 218979 AAATGGTGCCAATGGTATCGGGACAGGGT 219007 || ||||| | |||||||| || |||| Sbjct 2775432 GAACGGTGCGGACGGTATCGGCACCGGGT 2775404 Score = 84.2 bits (92), Expect = 4e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 217836 CTGCACTCTCATCCTGACAGAGGGAGACTCAGCTGCCACGCTGGCAACCGCTGGTCTTGC 217895 |||||| ||||||||||| ||||||||||| || |||||||| | || |||| Sbjct 2776623 CTGCACGCTCATCCTGACCGAGGGAGACTCCGCCAAGACGCTGGCCGTGTCGGGGCTTGG 2776564 Query 217896 CGTGGTGGGTCGTGAAAGGTATGGTATCTTCCCCCTCCGTGGTAAGCTGCTCAACGTGCG 217955 ||||| || || || | ||| || | || || || || ||||||||||| || ||||| Sbjct 2776563 GGTGGTCGGACGCGACACGTACGGCGTGTTTCCGCTGCGCGGTAAGCTGCTGAATGTGCG 2776504 Query 217956 CGATGC 217961 ||| || Sbjct 2776503 CGAGGC 2776498 >seq29 Length=1542149 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 1041898 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 1041839 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 1041838 CCCACGTTGGGC 1041827 >seq2 Length=16623535 Score = 86.0 bits (94), Expect = 1e-11 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 142049 GCATGTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTC 142108 ||||||| || ||||||| ||| ||||||||||||||||||||||||||| | |||||| Sbjct 12957964 GCATGTCCCTTTGGCGCAGCGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGTGGGTTC 12958023 Query 142109 GACCCCCGCCAGAGA 142123 || |||| | || || Sbjct 12958024 GATCCCCACAAGGGA 12958038 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027818745083011