Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20atroparvus_20[genbank_20GCA_5F000473505.1_202013-09-30] 1,371 sequences; 224,290,125 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq3 107 2e-18 seq8 100 2e-16 >seq3 Length=13649947 Score = 107 bits (118), Expect = 2e-18 Identities = 207/303 (68%), Gaps = 2/303 (1%) Strand=Plus/Minus Query 37827 ACGCACGATCTCTTGTGGAACGCGGCTCAAATTCAGCTTGTGCGCGAGGGTAAGATGCAT 37886 |||||||| | |||||||| |||| || | ||| | ||| ||||| |||||||| Sbjct 8055096 ACGCACGACGACCTGTGGAACTCGGCCCAGCTGCAGATGGTGAAGGAGGGCAAGATGCA- 8055038 Query 37887 CAGTATA-TGCGCATGTATTGGTGCAAGAAAATTTTGGAATGGTCTGATGATGCTCAGAC 37945 | || | |||||||||| ||| ||||| || | || ||| | | | | || Sbjct 8055037 CGGTTTCCTGCGCATGTACTGGGCGAAGAAGATACTCGAGTGGACCAAAACTCCCGAGGA 8054978 Query 37946 CGCGCTCAACTACGCCATTTATCTCAATGATAAGTACAGCTTGGACGGGCGTGATCCCAA 38005 |||||| | || || |||||||| || ||||||| |||| || || || || || Sbjct 8054977 AGCGCTCGAGACGGCAATCTATCTCAACGACCGGTACAGCCTGGATGGACGCGACCCGAA 8054918 Query 38006 CGGTTACGTCGGCTGTTTGTGGTCTATATGCGGGCTACACGATAGAGCCTGGCGCGAGAT 38065 ||| |||||||| || ||||||| || ||| | |||||| | |||| |||| Sbjct 8054917 CGGATACGTCGGTTGCATGTGGTCGATCGCCGGCATTCACGATCAGGGCTGGAAGGAGAG 8054858 Query 38066 TCCCATTTACGGCAAGATTCGGTACATGAACTACAACGGATGTGTTAGGAAGTTTAATGT 38125 || | ||| || || | |||||||||||| | |||||| | |||||||| || Sbjct 8054857 AGAAATCTTCGGTAAAATAAGATACATGAACTACGAAGGATGTAAGCGAAAGTTTAACGT 8054798 Query 38126 TAA 38128 ||| Sbjct 8054797 TAA 8054795 >seq8 Length=9380469 Score = 100 bits (110), Expect = 2e-16 Identities = 103/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || || | ||| |||||||||||||| || || |||||||||||||||||| || | | Sbjct 4936199 CCACCACGCAGGCGCAGCACCAGATGGAGGGTCGACTCCTTCTGAATGTTGTAGTCGGAC 4936140 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 | ||| | || |||| ||||||||||| || ||||| |||||||| ||| ||| Sbjct 4936139 AGCGTGCGCCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGCGGA 4936080 Query 34021 ACGCTCTCTTTGTCC 34035 | || ||| |||||| Sbjct 4936079 ATGCCCTCCTTGTCC 4936065 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397055765459542