Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20atroparvus_20[genbank_20GCA_5F000473505.1_202013-09-30] 1,371 sequences; 224,290,125 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq1 107 4e-18 >seq1 Length=20238125 Score = 107 bits (118), Expect = 4e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 297437 GTGAAAATATATCGTGCACTCGCGTGATCCTTACCACCCTGCAATCTCGAACCGAACTGG 297496 ||||| || || || | || ||| |||||| ||||| ||| | || ||||||||| Sbjct 2775559 GTGAAGATGTAACGCGGGCTGGCGCTATCCTTGCCACCGGTCAACCGCGTACCGAACTGA 2775618 Query 297497 CCCTCCGGCAACAACCAGTTGATGTTATTGCTTCCGACATAATCCTGTGCAAGGTTCACG 297556 || |||| ||| | ||||||||| || || |||||||||| ||| || ||||| | | Sbjct 2775619 CCGCCCGGGTACAGCAGGTTGATGTTGTTACTGCCGACATAATTCTGCGCCAGGTTGATG 2775678 Query 297557 ATGGTCCCTTGCAGAGATGCTTCGCCATGGTGATAGGCGCTATGCTCTGCAACGTAACCG 297616 || || || ||| || || ||||| |||||||||||| || || || ||||| Sbjct 2775679 ATCGTGCCGCACAGCGACGCCTCGCCGTGGTGATAGGCGGACATTTCCGCGACCGAACCG 2775738 Query 297617 CTGAACTGTGCAACCTTCACGTCG 297640 | ||| || |||||||| ||| Sbjct 2775739 GCCAGCTGGGCCACCTTCACCTCG 2775762 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102860626878850