Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20atroparvus_20[genbank_20GCA_5F000473505.1_202013-09-30] 1,371 sequences; 224,290,125 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq10 118 1e-21 seq19 102 1e-16 >seq10 Length=7496699 Score = 118 bits (130), Expect = 1e-21 Identities = 277/410 (68%), Gaps = 6/410 (1%) Strand=Plus/Minus Query 8526 TATCAAGCATCTTCCTCGGAGATGTTTGGTAAAGTTAGGGAATCCCCTCAAAATGAGGAG 8585 ||||| || || | || ||| | | || || || |||| | || || ||||| || Sbjct 1111535 TATCAGGCGTCCACTTCCGAGCTTTACGGCAAGGTGGTGGAAACGCCACAGAATGAAAAG 1111476 Query 8586 ACACCCTTCTATCCACGATCCGTCTATGGCGTCTCAAAGGT-TGCGGCACATTGGCTCGT 8644 |||||||||||||| || || || | | |||| | | |||| | ||| |||| Sbjct 1111475 ACACCCTTCTATCCGCGCTCTCCGTACGCCTGTGCAAAACTGTACGGCT-ACTGGATCGT 1111417 Query 8645 GAAGAATTACCGAGAATCCTATGGTCTCTTTGCGTGCTCCGGTATTCTCTTCAACCACGA 8704 || |||||||| ||| | || | | ||||| ||| || || || |||||||| || Sbjct 1111416 GATAAATTACCGCGAAGCGTACGACATGTTTGCCTGCAATGGCATCCTGTTCAACCATGA 1111357 Query 8705 GTCACCCCGTCGTGGCCCGGATTTCGTGACAAAGAAGATCAC-CGAT-GGTATCAAACAA 8762 ||| ||||| || || |||| || || ||||| || || | ||| |||| | Sbjct 1111356 GTCTCCCCGCCGGGGAGAAAATTTTGTCACCCGCAAGATAACGCGCTCGGTGGCAAAAAT 1111297 Query 8763 ATCGTCGCGGGTGAGAGGGAGTTCATTGAATTGGGGAACCTCAACGCCGAGAGGGACTGG 8822 ||| | ||| | ||| ||| | | || |||| || ||| || | || | |||||| Sbjct 1111296 TTCG-CTCGGTCAACAGG-AGTGCTTGGAGCTGGGCAATCTCGACTCGAAGCGTGACTGG 1111239 Query 8823 GGACACGCCAAGGACTATGTTGAAGCCATGTGGCTCGTACTTCAACAAGAAGAGGCGGAC 8882 || ||||| ||||||| || || ||||||||||| | | || || || | |||| Sbjct 1111238 GGCCACGCGCAGGACTACGTCGAGGCCATGTGGCTGATGATGCAGCAGGAGAAACCGGAA 1111179 Query 8883 GAATATGTCGTCGCGACGGGGGAGACACACTCCGTCAGGGAGTTCGTTGA 8932 || | |||| |||| || || ||||| ||||| || | || ||||| || Sbjct 1111178 GATTTTGTCATCGCCACCGGTGAGACGCACTCGGTGCGAGAATTCGTCGA 1111129 Score = 102 bits (112), Expect = 1e-16 Identities = 260/388 (67%), Gaps = 6/388 (2%) Strand=Plus/Plus Query 125870 AGGAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATG 125929 || || ||||| | |||| |||| ||||||| |||||| ||| |||||||||||| Sbjct 495351 AGCAGCCGATCGGCGACGAACTCGATGTACTGCGACATCAGATCACAGTTCATACCGAGC 495410 Query 125930 AGGTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACG 125989 | | |||||||| | | || |||| ||| ||| || ||| || || || | | Sbjct 495411 ATATCGACCGGGAGCGCCTTCGTGAGGAACTCCTGCTCGATCAGCACCGCATCGCGGATG 495470 Query 125990 ATGGCGTGAATGGTGTCCACCCCAGGTCTATTGCGCAAAGT-CTTGAAGAGTTCCAC-GG 126047 ||| | | || | | | | || ||| | | || |||||| | | || || Sbjct 495471 ATGCTGGTCACAC-GTTCGCGCGTCGGCTTCTGCACCAGGTACTTGAACA-TCAGACAGG 495528 Query 126048 CAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTG 126107 |||| || ||| || |||||||| || || || || || ||||||||| || || | Sbjct 495529 CAAAGTCGCAGTGCAGGCCCTCGTCGCGCGAAATCAGCTCGTTCGAGAAGGTCAAACCCG 495588 Query 126108 GCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCG-AGAAGAAGATT 126166 |||| || ||||||||||||| ||||||||| || || | |||| |||||||| Sbjct 495589 GCATCAGGCCCCGCTTCTTCAGCCAGAAAATGGCGGCGAA-GCTCCCGCTAAAGAAGATG 495647 Query 126167 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCAAAC 126226 ||||| || || ||||||| | ||||| ||||| | | ||| | | | Sbjct 495648 CCCTCGACGGCGGCAAACGCAACCACCCGCTCGCCAAAGTTGGCCTTCTTGCTCGAGATC 495707 Query 126227 CACTTCATCGCCCACTGCGCCTTTTTCT 126254 || |||| |||||| | ||||| |||| Sbjct 495708 CAGTTCAGCGCCCAGTCGGCCTTCTTCT 495735 >seq19 Length=3534686 Score = 102 bits (112), Expect = 1e-16 Identities = 183/265 (69%), Gaps = 2/265 (1%) Strand=Plus/Minus Query 114467 AGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATT 114526 || |||||||| |||||||| || || | | |||||||| | |||||| | ||| Sbjct 2153581 AGCGCGATTGATGCCAGATTGCAGACCGCTATTTCATCCTTGGACGAGTACTCGACGATT 2153522 Query 114527 TCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTA 114586 ||||| |||| ||||| | ||| || ||||||| ||||| ||| || ||| || Sbjct 2153521 TCCGTGCACAGGTTTGAGCACTTGATTGTGCCCACGTTCTGTTGGTTGCTCTTGCGATTG 2153462 Query 114587 CACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCC 114646 |||||||||||||| |||||||| || |||||||| || || | || || || Sbjct 2153461 CACGCATCCTTGTACAGCATGTACGGGACGCCCGTCTCGACCTGCGATTCGATGATGGCA 2153402 Query 114647 TTCCAGACAT-CGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGT 114705 ||| | || | | | || | | | | | | || ||||||| |||||| ||| Sbjct 2153401 AACCACAGATCCTGAGCCTTGACCTGACG-GATAAACCGGCCCTCCTTCTCGTAGCCTGT 2153343 Query 114706 GTAGAGGGCTTCAAACTCTTCACCC 114730 |||||| ||||||||| || ||| Sbjct 2153342 GTAGAGCTTTTCAAACTCCTCTCCC 2153318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597343362852680