Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20atroparvus_20[genbank_20GCA_5F000473505.1_202013-09-30] 1,371 sequences; 224,290,125 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq19 304 1e-77 >seq19 Length=3534686 Score = 304 bits (336), Expect = 1e-77 Identities = 1083/1671 (65%), Gaps = 65/1671 (4%) Strand=Plus/Plus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777 ||| |||| |||| ||||||||| ||||| ||||||||| || ||||| | |||| | Sbjct 2152656 TACAATTATTTTGGCTTCAAAACGCTGGAACGGTCGTACCTGCTGAAGATCAAGGGCAAG 2152715 Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837 | ||||||||||| || ||||||||||||| |||||||| ||||||||| | || Sbjct 2152716 ATCGTTGAGCGACCGCAGCATATGCTGATGCGCGTAGCCATCGGCATTCACGGCGAGGAT 2152775 Query 93838 ATGCCGAATGTTTTGCGGGCTTTCAGAGAC--ATGCGGGACA-----AGAGGTA---TAC 93887 || ||| ||||| | | |||||| || || || | || ||| Sbjct 2152776 AT--CGA------TGCGGCCAT--AGAGACCTATAATCTACTCTCGGAGCGTTACTTTAC 2152825 Query 93888 -CATGGCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTT 93946 |||| | | || || |||| || | ||| | || ||| | ||||| || | Sbjct 2152826 GCATG-CGTCGCCTACATTGTTTGCGGCTGCGACACAACGTCCGCAGCTTTCTTCCTGCT 2152884 Query 93947 TCCTGATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTG 94006 | ||| |||||| || |||| |||| || |||| ||||| | ||| | || | Sbjct 2152885 TTCTGCTGACGATGTCGGACGACAGCATCGAGGGCATTTACGACACGTTGAAGCAGTGCG 2152944 Query 94007 CGACCATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGG 94066 || || || || | || || || || || | | ||||||| | | ||||| | || Sbjct 2152945 CGCTGATTTCGAAGTCGGCCGGAGGCATTGGCTTGAATGTCCACTGCATCCGTGCGAAGG 2153004 Query 94067 GTTCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCT 94126 | | |||||| || || || || | |||||||| || || || ||||| || |||| Sbjct 2153005 GAACGTACATCGCAGGCACGAACGGAATTTCCAACGGGCTGGTGCCGATGCTGCGCGTCT 2153064 Query 94127 TCAACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGG 94186 ||||||| | |||||||| || |||||||| || | | | ||| | |||||| Sbjct 2153065 ACAACAACACCGCGCGCTATGTCGACCAGGGCGGCAACAAGCGCCCCGGTGCGTTCGCGA 2153124 Query 94187 TCTATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACG 94246 |||| |||||||| ||||||| || ||| | || |||| ||| |||||| || Sbjct 2153125 TCTACCTCGAGCCGTGGCACGGCGATGTGTTCGAGTTTCTCGATCTGAAGAAGAACACCG 2153184 Query 94247 GCAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTA 94306 |||| || || | || | ||| | |||||||| ||||||||||| || || || | Sbjct 2153185 GCAAGGAGGAGGTCCGCGCGCGCGACATGTTCTACGCCCTCTGGGTGCCGGATCTGTTCA 2153244 Query 94307 TGAAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGAC 94366 || | ||||||||| ||| ||||| | | || || | || |||||||||| Sbjct 2153245 TGCAGCGCGTCGAGGCGAACGAGATGTGGAGCTTGATGTGCCCGCACGATTGTCCCGGAC 2153304 Query 94367 TGTCCGACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCA 94426 |||| || || ||| | |||||| | | || | | ||||| | ||||| Sbjct 2153305 TGTCGGATTCGTGGGGAGAGGAGTTTGAAAAGCTCTACACAGGCTACGAGAAGGAGGGCC 2153364 Query 94427 AG---GCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGG 94483 | | | |||| | | ||| | | |||||| | ||| | || |||| Sbjct 2153365 GGTTTATCCGTCAGGTCA---AGGCTCAGGATCTGTGGTTTGCCATCATCGAATCGCAGG 2153421 Query 94484 TGGAGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGC 94543 | |||||||| || ||||| ||| |||||| | ||| |||| |||||| | Sbjct 2153422 TCGAGACGGGCGTCCCGTACATGCTGTACAAGGATGCGTGCAATCGCAAGAGCAACCAAC 2153481 Query 94544 AGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTC 94603 || || | || |||||| |||| || |||||||| || || |||||||| | || Sbjct 2153482 AGAACGTGGGCACAATCAAGTGCTCAAACCTGTGCACGGAAATCGTCGAGTACTCGTCCA 2153541 Query 94604 CGGACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATG 94663 ||| || || || || || || |||| || ||| ||| || ||||| || | Sbjct 2153542 AGGATGAAATAGCGGTCTGCAATCTGGCATCAATCGCGCTGAACATGTTCGT----GAAG 2153597 Query 94664 CCTACACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGG 94723 || | | || ||| |||| | | | | || | | |||| | || | Sbjct 2153598 CC----GGACCAC----ACGTACGATTTTGCGAAACTGAAGGAAGTCGC---CAAGACTG 2153646 Query 94724 TCTTG---AACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGA 94780 || | |||||||||| | ||||||| |||| |||||| || ||||| ||| || Sbjct 2153647 TCACGCGCAACCTGAACAAAATCATCGACATTAACTACTACCCGGTGCCGGAAGCGAAGC 2153706 Query 94781 ACTCAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGG 94840 ||| ||| || || |||| ||||| |||||||| ||||| | || || ||| | Sbjct 2153707 GCTCCAACATGCGCCACAGGCCGATCGGTATCGGCGTGCAGGGCATGGCCGATGCGTTCA 2153766 Query 94841 TGATGATGCGTCTGCCC-TACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTC 94899 | ||||||| || ||| ||||| || || ||| | |||| | || ||| Sbjct 2153767 TTCTGATGCG-CTACCCGTACGAGAGTGAAGAGGCGCAGAAGCTGAACCAACAAATCTTC 2153825 Query 94900 GAAAGCATTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGAT--CGGACGGCG 94957 |||| ||| || ||||| || || | | ||| || | || | | | | ||| Sbjct 2153826 GAAACCATCTACTACGGCGCTTTGGA-------GGCCAGTT-GTGAGCTGGCCGCCCGCG 2153877 Query 94958 --GGC-CACACGAATCGTTCCGCGGATCGCCCTTGGAAC-AGGGCATTTTTCAGTTCGAC 95013 ||| | |||| || | || || | || | | |||| || | |||| |||| Sbjct 2153878 ATGGCACGTACGAGACG-TACGAGGGCAGTCCGGTCAGCAAGGGGATGCTGCAGTACGAC 2153936 Query 95014 CTCTGGGGTGTGAAGCCCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATC 95073 | ||| || ||| | | |||| |||||| | || | | || | Sbjct 2153937 ATGTGGAACAAGACCCCCACCGAGCTGTGGAACTGGGGTGTGCTGAAGGAAAAGATTGCC 2153996 Query 95074 AAACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAG 95133 || || || || ||| |||| || |||| || ||||| || || ||||| |||||| Sbjct 2153997 AAGCATGGCGTTCGCAACTCGCTTCTGTTGGCTCCGATGCCGACCGCTTCCACCGCGCAG 2154056 Query 95134 ATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTG 95193 ||| | |||||||||||||||||||| || | ||| || ||||| ||||| |||| ||| Sbjct 2154057 ATCTTGGGCAACAACGAGTCGTTCGAGCCGTACACTTCGAACGTCTACAATCGGCGTGTG 2154116 Query 95194 CTCGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTCTGGGT 95253 || | || || |||| ||| |||| | || | |||| |||||||||| | | || Sbjct 2154117 CTGTCGGGCGAGTTCCAGGTCGTCAATCATCATTTGCTACAGGACCTGACGGATTTAGGC 2154176 Query 95254 GTGTGGGGTGACAAGGTCAAGAACCAACTGCTACGCGC-CAACGGCTCCGTCCAGAACAT 95312 |||||| || | | || || |||| | ||||| ||| || ||| ||||||| || Sbjct 2154177 CTGTGGGACGATGAAATGAA-AAACAACATCCTCGCGCACAATGGTTCCATCCAGAAGAT 2154235 Query 95313 CCCGCAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGAT 95363 | | |||| ||| || ||||| | | |||||||| || ||||| || Sbjct 2154236 CGAGGAAATTCCGCAGCACATCCGCGACTTGTACAAGACGGTTTGGGAAAT 2154286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494714721681160