Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20atroparvus_20[genbank_20GCA_5F000473505.1_202013-09-30] 1,371 sequences; 224,290,125 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq19 289 3e-73 >seq19 Length=3534686 Score = 289 bits (320), Expect = 3e-73 Identities = 1206/1878 (64%), Gaps = 54/1878 (3%) Strand=Plus/Plus Query 122831 CGATTACGAATACAAATATTTTGGATACAAAACGTTAGAAAACGGA--TATTTGaaaaaa 122888 ||||| || ||||| |||||||| | ||||||| | ||| ||| || || || Sbjct 2152646 CGATTTCGGCTACAATTATTTTGGCTTCAAAACGCTGGAA--CGGTCGTACCTGCTGAAG 2152703 Query 122889 aTCGAGGAAAAGGTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGTG 122948 ||| ||| ||| ||| || || || |||||||| |||||||| || || ||| | Sbjct 2152704 ATCAAGGGCAAGATCGTTGAGCGACCGCAGCATATGCTGATGCGCGTAGCCATCGGCATT 2152763 Query 122949 CACGGACGCGACATCGAAAACGCGACCGAAACTTACGATTTGATGTCTCAAAAATTTTTC 123008 ||||| || ||||| || | || || || || | | || | | || Sbjct 2152764 CACGGCGAGGATATCGATGCGGCCATAGAGACCTATAATCTACTCTCGGAGCGTTACTTT 2152823 Query 123009 ACGCACGCGAGTCCCACTTTGTTCGCCGC--CGGCACGAAGTTGCCTCAGTTGTCTTCGT 123066 ||||| ||| || || ||||| || || || ||| | || || ||| | ||||| | Sbjct 2152824 ACGCATGCGTCGCCTACATTGTTTGCGGCTGCGACACAACGT--CCGCAGCTTTCTTCCT 2152881 Query 123067 GTTTTTTGCTCACCTTGCGCGAAGACAGCATCACCGGTATCTATGAAACTTTGCGCGATT 123126 | ||| |||| || || || ||||||||| || || || || || ||| | | Sbjct 2152882 GCTTTCTGCTGACGATGTCGGACGACAGCATCGAGGGCATTTACGACACGTTGAAGCAGT 2152941 Query 123127 GCGCGTTGATTTCCAAATTTGGCGGCGGCATAGGCGTGAACGTGCACGACGTAAGAGGCC 123186 ||||| ||||||| || | | ||| ||||| ||| |||| || ||| | | | | Sbjct 2152942 GCGCGCTGATTTCGAAGTCGGCCGGAGGCATTGGCTTGAATGTCCACTGCATCCGTGCGA 2153001 Query 123187 GCGGAAGCCGCATCAGAAGCACCGACGGAATCGCCTCCGGGCTCGAATCCATGCTGCGAG 123246 |||| |||| | |||| ||||||| || |||||| | | |||||||| | Sbjct 2153002 AGGGAACGTACATCGCAGGCACGAACGGAATTTCCAACGGGCTGGTGCCGATGCTGCGCG 2153061 Query 123247 TTTACAATAACGCCGTGCGGCACGTCGACCAGGGCGGCAAA---CGCAAAGGCGCGATGG 123303 | ||||| ||| ||| ||| | ||||||||||||||||| ||| || ||| | | Sbjct 2153062 TCTACAACAACACCGCGCGCTATGTCGACCAGGGCGGCAACAAGCGCCCCGGTGCGTTCG 2153121 Query 123304 CGATCTATCTAGAACCGTGGCACGTTGATGTGTACGATTTTTTAAATTTAAAACGCAACA 123363 ||||||| || || |||||||||| ||||||| ||| ||| | || | || |||| Sbjct 2153122 CGATCTACCTCGAGCCGTGGCACGGCGATGTGTTCGAGTTTCTCGATCTGAAGAAGAACA 2153181 Query 123364 TGGGGGCGGAAGAAAAGAAAGCCCGCGATTTGTTGTACGCTTTATGGGTACCCGATTTGT 123423 || ||| || || ||||| |||| ||||| | ||||| || ||| ||| Sbjct 2153182 CCGGCAAGGAGGAGGTCCGCGCGCGCGACATGTTCTACGCCCTCTGGGTGCCGGATCTGT 2153241 Query 123424 TTATGCGACGCGTAAAAGACGACGGCGTGTGGTCGCTCATGTGTCCCGATCGGT-GTCCC 123482 | |||| ||||| | | ||| ||||| | ||||| |||| || | ||||| Sbjct 2153242 TCATGCAGCGCGTCGAGGCGAACGAGATGTGGAGCTTGATGTG-CCCGCACGATTGTCCC 2153300 Query 123483 GGCTTGAGCGACGTTTACGGCAATCAGTTTGACGAGTTGTACGCGCAATACGAGCGCGAA 123542 || || || | || | ||||||| || | ||| | |||||| || Sbjct 2153301 GGACTGTCGGATTCGTGGGGAGAGGAGTTTGAAAAGCTCTACACAGGCTACGAGAAGGAG 2153360 Query 123543 GGCAAACAGGTTA---GTCAGGTTCCGGCACGTGATTTGTTCAAATTT---ATTATCGAA 123596 ||| | | ||| ||||||| ||| | ||| ||| ||| || |||||| Sbjct 2153361 GGC---CGGTTTATCCGTCAGGTCAAGGCTCAGGATCTGTGG---TTTGCCATCATCGAA 2153414 Query 123597 ACACAAGTCGAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAACAGGAAAACC 123656 | || ||||| || || ||||||||||| ||||| || || ||||| | || | | Sbjct 2153415 TCGCAGGTCGAGACGGGCGTCCCGTACATGCTGTACAAGGATGCGTGCAATCGCAAGAGC 2153474 Query 123657 AATCAGAGCAACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAATTATCGAATAC 123716 || || ||| |||| ||||| || || || || ||| | ||||| |||| ||| Sbjct 2153475 AACCAACAGAACGTGGGCACAATCAAGTGCTCAAACCTGTGCACGGAAATCGTCGAGTAC 2153534 Query 123717 AG--CGATGCCGATCAAGTGGCCGTGTGTAATTTGGCTTCGATTTGCG-TGAATCGTTGC 123773 | | | ||| || | || || || ||| |||| || || ||| |||| | | Sbjct 2153535 TCGTCCAAG--GATGAAATAGCGGTCTGCAATCTGGCATCAATC-GCGCTGAACATGTTC 2153591 Query 123774 GTCGAAAACGG----CGCTTTTAATTT--CCAAACGCTCAAACGCATAACAAAAACTGTA 123827 || ||| ||| | | | |||| | |||| | || | | || ||||| Sbjct 2153592 GT-GAAGCCGGACCACACGTACGATTTTGCGAAAC--TGAAGGAAGTCGCCAAGACTGTC 2153648 Query 123828 GTAAAGAATTTGAACAAAATTATCGATGTTAATTTTTATCCTTTGGAGGAAGCGCGTTTG 123887 || |||||||||| ||||| |||| | || || || ||||||| Sbjct 2153649 ACGCGCAACCTGAACAAAATCATCGACATTAACTACTACCCGGTGCCGGAAGCGAAGCGC 2153708 Query 123888 TCTAATTTGAAACACAGACCGGTCGGAGTGGGCATTCAAGGGTTGGCCGACGCGTTTGTA 123947 || || || ||||| ||| |||| | ||| | || || ||||||| ||||| | Sbjct 2153709 TCCAACATGCGCCACAGGCCGATCGGTATCGGCGTGCAGGGCATGGCCGATGCGTTCATT 2153768 Query 123948 ATGCTGCGCATGCCGTACGAAAGCGACGAAGCAAAGTTGCTTAATACGCAAATAGCCGAA 124007 || ||||| |||||||| || || || || || ||| || ||||| |||| Sbjct 2153769 CTGATGCGCTACCCGTACGAGAGTGAAGAGGCGCAGAAGCTGAACCAACAAATCTTCGAA 2153828 Query 124008 ACAATTTATTACGGCGCTTTGGAGGCGAGCTGCGAACTTGCGAAAATTCACGGCGCGTAC 124067 || || || ||||||||||||||||| || || || || || | ||| ||||| Sbjct 2153829 ACCATCTACTACGGCGCTTTGGAGGCCAGTTGTGAGCTGGCCGCCCGCGATGGCACGTAC 2153888 Query 124068 GAAAGTTACGCGGGCAGCCCGGCGAGCCGAGGTATTTTGCAGTACGACATGTGGAATGCT 124127 || | |||| |||||| |||| ||| || || ||||||||||||||||||| Sbjct 2153889 GAGACGTACGAGGGCAGTCCGGTCAGCAAGGGGATGCTGCAGTACGACATGTGGAACAAG 2153948 Query 124128 ACACCGACAAATTTGTGGGACTGGAGCGTTTTAAAACAACGCATATCGACGCACGGTTTG 124187 || || || | ||||| ||||| | || | || || || | | ||| || | Sbjct 2153949 ACCCCCACCGAGCTGTGGAACTGGGGTGTGCTGAAGGAAAAGATTGCCAAGCATGGCGTT 2154008 Query 124188 CGTAACTCGCTGTTGGTGGCGTACATGCCGACGGCAACCACTGCTCAAATTTTAGGAAAC 124247 || |||||||| || |||| |||||||| || |||| || || || || || ||| Sbjct 2154009 CGCAACTCGCTTCTGTTGGCTCCGATGCCGACCGCTTCCACCGCGCAGATCTTGGGCAAC 2154068 Query 124248 AACGAATCCTTCGAGCCGTTCACTAACAATTTGTACGTGCGACGAGTGTTAGCCGGCGAT 124307 ||||| || |||||||||| |||| || | ||| || || ||| | | ||||| Sbjct 2154069 AACGAGTCGTTCGAGCCGTACACTTCGAACGTCTACAATCGGCGTGTGCTGTCGGGCGAG 2154128 Query 124308 TTTCAAGTGATAAATCATCATTTGGTGGACGACTTGGTGGCGTTAAATTTGT---ACGAT 124364 || || || | |||||||||||| | | ||| || || ||| ||| ||||| Sbjct 2154129 TTCCAGGTCGTCAATCATCATTTGCTACAGGACCTGACGGATTTAGGCCTGTGGGACGAT 2154188 Query 124365 GAAAACATGCGCAACGAAATTATTGCGGCCGGTGGCAGCGTGCAGCGCATCGCTTCGATT 124424 ||| ||| ||| | || | ||| | ||| | | ||| |||| ||| Sbjct 2154189 GAA---ATGAAAAACAACATCCTCGCGCACAATGGTTCCATCCAGAAGATCGAGGAAATT 2154245 Query 124425 CCGGAACACGTCAAGCAAC-TGTACAAAACCGTGTGGGAAAT---GAAAAATAAACGATT 124480 ||| | ||| || || || ||||||| || || |||||||| | | ||||| | Sbjct 2154246 CCGCAGCACATC-CGCGACTTGTACAAGACGGTTTGGGAAATTTCGGTGA--AAACG-TG 2154301 Query 124481 AATTGAAATGGCCGTCGACCGAGGCGCGTACACGGATCAAAGTCAATCTTTTAACGTGTT 124540 || ||||||| | ||| || || |||| || || || || || || ||| | Sbjct 2154302 TATCAAAATGGCGGCCGATCGTGGGGCGTTCATTGACCAGTCGCAGTCGTTCAACATTCA 2154361 Query 124541 TGTAGCGGAACCCACCTACGCCCGCATGACCAGCATACACATGCACGCGTGGAGCAGCGG 124600 || || || || | || | |||| || || | ||| |||| | || Sbjct 2154362 CGTGGCCGAGCCGAATTATGGTAAGCTGACGTCGATTCATTTCTACGGCTGGAAGATGGG 2154421 Query 124601 ACTCAAAACGGGCATGTATTACTTAAGAACCAAACCGGCGGCCGATGCCATTCAATTTAC 124660 || || ||||||||||| ||| | | ||||| ||||| | | || || || ||||| Sbjct 2154422 CCTGAAGACGGGCATGTACTACCTGCGCACCAAGCCGGCAGTGAACGCGATCCAGTTTAC 2154481 Query 124661 CGTCGACAAATCTAAACT 124678 ||||||||||| || || Sbjct 2154482 GGTCGACAAATCGAAGCT 2154499 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451995453795160