Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20atroparvus_20[genbank_20GCA_5F000473505.1_202013-09-30] 1,371 sequences; 224,290,125 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq19 136 5e-27 seq10 129 7e-25 >seq19 Length=3534686 Score = 136 bits (150), Expect = 5e-27 Identities = 678/1069 (63%), Gaps = 28/1069 (3%) Strand=Plus/Plus Query 111933 CCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAACCAAGCTGGGCGTCG-CAA 111991 || ||||| ||||| | ||| ||| ||||||||||| |||| ||||| | ||| Sbjct 2153049 CCGATGCTGCGCGTCTACAACAACACCGCGCGCTATGTCGACCA----GGGCGGCAACAA 2153104 Query 111992 G------GGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCT 112045 | || | |||| |||| || ||||| ||||||| ||| | | ||||| || Sbjct 2153105 GCGCCCCGGTGCGTTCGCGATCTACCTCGAGCCGTGGCACGGCGATGTGTTCGAGTTTCT 2153164 Query 112046 TGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCT 112105 || || ||| || | ||||||| || ||||| | |||| ||| || Sbjct 2153165 CGATCTGAAGAAGAACACCGGCAAGGAGGAGGTCCGCGCGCGCGACATGTTCTACGCCCT 2153224 Query 112106 CTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTG 112165 |||| | || ||||| |||||| || | || |||| || | | ||| | | || Sbjct 2153225 CTGGGTGCCGGATCTGTTCATGCAGCGCGTCGAGGCGAACGAGATGTGGAGCTTGATGTG 2153284 Query 112166 TCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTCTACAC 112225 || || | ||||| || || ||| | ||| |||||||||||| |||||||| Sbjct 2153285 CCCGCACGATTGTCCCGGACTGTCGGATTCGTGGGGAGAGGAGTTTGAAAAGCTCTACAC 2153344 Query 112226 AAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGTGCCAG-CTGCCGATGTGTGGAAAG 112284 | |||||| | || | ||| | | || | | | || || ||| ||||| | Sbjct 2153345 AGGCTACGAGAAGGAGGGCCGGTTTA-TCCGTCAGGTCAAGGCTCAGGATCTGTGGTTTG 2153403 Query 112285 CTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTA 112344 | || || | || || |||||| || || || ||||| ||||| || || || | Sbjct 2153404 CCATCATCGAATCGCAGGTCGAGACGGGCGTCCCGTACATGCTGTACAAGGATGCGTGCA 2153463 Query 112345 ACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAA 112404 | | ||||| || ||| |||| |||| |||||| | || ||||| || || |||| Sbjct 2153464 ATCGCAAGAGCAACCAACAGAACGTGGGCACAATCAAGTGCTCAAACCTGTGCACGGAAA 2153523 Query 112405 TCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCC 112464 || | || | | ||| ||||| | || || || || || ||||||||||| || Sbjct 2153524 TCGTCGAGTACTCGTCCAAGGATGAAATAGCGGTCTGCAATCTGGCATCAATCGCGCTGA 2153583 Query 112465 CCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGA 112524 || || ||| | || || | || | |||| || ||||| | ||||| | | Sbjct 2153584 ACATGTTCGTGAAGCCGGA---CCACACGTACGATTTTGCGAAACTGAAGGAAGTCGCCA 2153640 Query 112525 AAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTG 112584 | |||||||| ||||| |||| | | || || | || | ||||| || | | Sbjct 2153641 AGACTGTCACGCGCAACCTGAACAAAATCATCGACATTAACTACTACCCGGTGCCGGAAG 2153700 Query 112585 CTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATG 112644 | || || ||| | ||| | || || ||| |||| || || || | || |||| Sbjct 2153701 CGAAGCGCTCCAACATGCGCCACAGGCCGATCGGTATCGGCGTGCAGGGCATGGCCGATG 2153760 Query 112645 TATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTA 112704 |||||||| ||| || | | || || || ||| || | | || | | Sbjct 2153761 CGTTCATTCTGATGCGCTACCCGTACGAGAGTGAAGAGGCGCAGAAGCTGAACCAACAAA 2153820 Query 112705 TATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATG 112764 | || || || || || ||| |||| | ||||| |||| ||| |||| | |||| Sbjct 2153821 TCTTCGAAACCATCTACTACGGCGCTTTGGAGGCCAGTTGTGAGCTGGCCGCCCGCGATG 2153880 Query 112765 GTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCA-CAAGGGG-TGCTTCAATTTGATAT 112822 | | || || || | ||||| ||| | ||| ||||||| |||| || | || || Sbjct 2153881 GCACGTACGAGACGTACGAGGGCAGTCCGG--TCAGCAAGGGGATGCTGCAGTACGACAT 2153938 Query 112823 GTGGGAAGGTGA----GACCAAGCTTCACTACGACTGGGACGCTCTCAAGGAACGCATCA 112878 || |||| || ||| |||| | |||||| | || |||||| || Sbjct 2153939 GT-GGAACAAGACCCCCACCGAGCT---GTGGAACTGGGGTGTGCTGAAGGAAAAGATTG 2153994 Query 112879 AGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCAC 112938 || | || |||| ||| ||| || |||| || ||||| || || |||||||| | Sbjct 2153995 CCAAGCATGGCGTTCGCAACTCGCTTCTGTTGGCTCCGATGCCGACCGCTTCCACCGCGC 2154054 Query 112939 AAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTA 112987 | |||||||| || || || | || || || ||||| ||||| |||| Sbjct 2154055 AGATCTTGGGCAACAACGAGTCGTTCGAGCCGTACACTTCGAACGTCTA 2154103 >seq10 Length=7496699 Score = 129 bits (142), Expect = 7e-25 Identities = 271/398 (68%), Gaps = 6/398 (2%) Strand=Plus/Minus Query 13597 TCTATCAAGCCTCTTCATCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAACGAGG 13656 ||||||| || || | || ||| | | || ||||| ||| | ||||| || || Sbjct 1111537 TCTATCAGGCGTCCACTTCCGAGCTTTACGGCAAGGTGGTGGAAACGCCACAGAATGAAA 1111478 Query 13657 AGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGT-TGCGGCACATTGGCTC 13715 ||||||||||||| || ||||| |||| |||| | | |||| | ||| || Sbjct 1111477 AGACACCCTTCTATCCGCGCTCTCCGTACGCCTGTGCAAAACTGTACGGCT-ACTGGATC 1111419 Query 13716 GTAAAGAATTACCGCGAGTCTTACGGACTGTTTGCATGCTCCGGAATCCTCTTCAACCAT 13775 || | ||||||||||| | |||| ||||||| ||| || ||||| ||||||||| Sbjct 1111418 GTGATAAATTACCGCGAAGCGTACGACATGTTTGCCTGCAATGGCATCCTGTTCAACCAT 1111359 Query 13776 GAATCACCGAGACGAGGTGCAGACTTTGTGACCATGAAGATTAC-CG-AGGGTATCAAAC 13833 || || || | || || | | | ||||| ||| ||||| || || ||| ||| Sbjct 1111358 GAGTCTCCCCGCCGGGGAGAAAATTTTGTCACCCGCAAGATAACGCGCTCGGTGGCAA-- 1111301 Query 13834 AAATCATGAAGGGTGAAAAGGAGTTCATTGAATTGGGTAACATAAACGCGGAGAGAGATT 13893 |||| | ||| || |||||| | | || |||| || | || || || | || | Sbjct 1111300 AAATTTCGCTCGGTCAACAGGAGTGCTTGGAGCTGGGCAATCTCGACTCGAAGCGTGACT 1111241 Query 13894 GGGGTCACGCGAAGGACTATGTTGAAGCTATGTGGCTCATGCTTCAACAAGAGGAAGCCG 13953 |||| |||||| ||||||| || || || |||||||| ||| | || || ||| || | | Sbjct 1111240 GGGGCCACGCGCAGGACTACGTCGAGGCCATGTGGCTGATGATGCAGCAGGAGAAACCGG 1111181 Query 13954 ACGAATATGTAGTAGCAACGGGTGAGACCCATTCAGTG 13991 | || | ||| | || || |||||||| || || ||| Sbjct 1111180 AAGATTTTGTCATCGCCACCGGTGAGACGCACTCGGTG 1111143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620731762027120