Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20atroparvus_20[genbank_20GCA_5F000473505.1_202013-09-30] 1,371 sequences; 224,290,125 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq5 122 1e-22 >seq5 Length=11808074 Score = 122 bits (134), Expect = 1e-22 Identities = 315/475 (66%), Gaps = 4/475 (1%) Strand=Plus/Plus Query 11497 ATCTTACGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTT 11556 |||| |||||||| ||||| || || || || || | ||| || || || || ||||| Sbjct 11629686 ATCTGTCGATCGAAGCGACCCGGTCGAAGCAGCGCCTTATCTAGGATGTCCACCCGGTTG 11629745 Query 11557 GTAGCGGCAATGACTACAATGCCAGTCTCATTGTCGAAACCGTCCATTTCTGTGAGAAGC 11616 || ||||| | || || | | ||| ||| ||| |||||||| || || ||| Sbjct 11629746 GTCGCGGCCAGTACGACCACGTTCGTCGTCGTGTTGAACCCGTCCATCTCGACCAGCAGC 11629805 Query 11617 TGGTTGATCGTCTGTTCACGCTCATCGTTGGAGGGCATACCACCTGCCGA-ACGCTTCTT 11675 ||||||| ||| | ||| |||| || | | | | | | ||| ||||||| Sbjct 11629806 TGGTTGAGCGTGTTTTCCTGCTCCGAGT-GTCCTCCGAAGCTCTTTCCGCCACGCTTCCG 11629864 Query 11676 ACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGTTC 11735 ||||| ||||| || ||||||||||| | || || ||| | || ||| | Sbjct 11629865 GCCGACGGCGTCGATTTCATCGATGAACAGAATGCAGGGTGCACTCTTGCGCGCCATCGC 11629924 Query 11736 GAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGC 11795 ||| | || || |||||| | || || || ||||||||||| | || | | | | Sbjct 11629925 GAACATATCGCGCACACGCGATGGACCCACGCCGACGAACATCTCCAAAAACTCCGAGCC 11629984 Query 11796 AGA-ACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCT 11854 || || || ||||| || || || | |||||| ||| | || |||||||| || | Sbjct 11629985 CGAGACGGTG-ATGAACGGGACGTTCGCCTCACCGGCGGTCGCCTTGGCGAGGAGCGTTT 11630043 Query 11855 TACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCACTTCCAA 11914 | |||||||| || | ||| | || | |||||| ||| || || |||||| | | Sbjct 11630044 TGCCCGTACCCGGCGGACCGGTCAGCATGGCGCCTTTGGGAATTTTCGCACCAAGATCGA 11630103 Query 11915 AGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGC 11969 ||| ||| || || |||||||| | ||||| |||| || ||| |||||| Sbjct 11630104 TGTACTGCTGGGGGTTTTTGAGGAAATTCACAAACTCCATAATTTCAATCTTGGC 11630158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588965906423800