Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20atroparvus_20[genbank_20GCA_5F000473505.1_202013-09-30] 1,371 sequences; 224,290,125 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq4 86.0 5e-11 >seq4 Length=12071184 Score = 86.0 bits (94), Expect = 5e-11 Identities = 172/255 (67%), Gaps = 0/255 (0%) Strand=Plus/Minus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057 ||||| ||| | ||||| || || || || ||||| || | || | || || || ||| Sbjct 8966198 GGTATTGATCTGGGAACGACCTACAGCTGCGTTGGAGTGTTCCAGCACGGCAAGGTAGAA 8966139 Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117 ||||||||||| || || |||||| | || || || || ||||| | ||||| || || Sbjct 8966138 ATTATTGCCAACGACCAGGGTAACCGTACGACGCCGTCCTATGTGGCCTTCACCGATACG 8966079 Query 550118 GAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACTATT 550177 || | | | | || ||||| || || | || | | || || ||||| || || Sbjct 8966078 GAGCGTCTGATCGGCGATGCCGCCAAGAACCAGGTGGCGATGAACCCGACCAACACAATC 8966019 Query 550178 TTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGATATG 550237 || || || || || | || ||| | | || | || || | | ||||| || ||| Sbjct 8966018 TTCGACGCCAAGCGCCTGATCGGACGCAAGTTCGACGACCCGGCCATCCAGGCTGACATG 8965959 Query 550238 AAGCATTGGCCTTTC 550252 ||||| ||||| ||| Sbjct 8965958 AAGCACTGGCCGTTC 8965944 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029223495336790