Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20atroparvus_20[genbank_20GCA_5F000473505.1_202013-09-30] 1,371 sequences; 224,290,125 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq10 168 9e-37 >seq10 Length=7496699 Score = 168 bits (186), Expect = 9e-37 Identities = 271/387 (70%), Gaps = 2/387 (1%) Strand=Plus/Plus Query 47788 CCTGTGGCAATAACAAAATCATCAGGTTCTTCTTGTTGAAGCATTAACCACATAGCCTCG 47847 || ||||| || |||||||| || |||| || || || | ||| | |||||| |||||| Sbjct 1111159 CCGGTGGCGATGACAAAATCTTCCGGTTTCTCCTGCTGCATCATCAGCCACATGGCCTCG 1111218 Query 47848 ACATAATCTCTG-GCATGTCCCCAGTCACGAAGTGCATCAAGATTTCCTAGATATAAACA 47906 || || || ||| || || ||||||||||| | || ||||| || || | || || Sbjct 1111219 ACGTAGTC-CTGCGCGTGGCCCCAGTCACGCTTCGAGTCGAGATTGCCCAGCTCCAAGCA 1111277 Query 47907 GTCTTGCTTACCTTCAGAGATTGCTTTTAATGCTCTTGTAATCTTACGAGTTACAAAAGT 47966 || || | ||| || ||| | | | | || ||||| || || |||||| | Sbjct 1111278 CTCCTGTTGACCGAGCGAAATTTTTGCCACCGAGCGCGTTATCTTGCGGGTGACAAAATT 1111337 Query 47967 TTCACCACGTCTTGGAGATTCATGATTAAAAAGAATACCACTACAGGCATACATTCCGTA 48026 ||| || || | ||||| ||||| || || || || ||| | |||||| |||| |||| Sbjct 1111338 TTCTCCCCGGCGGGGAGACTCATGGTTGAACAGGATGCCATTGCAGGCAAACATGTCGTA 1111397 Query 48027 TGATTCACGATAGTTCTTTACTATCCAGTACCCATAGAGTTTTGCAACACCATAAGGAGA 48086 | ||| || || || | || |||||||| || || ||||||||| | || ||||| Sbjct 1111398 CGCTTCGCGGTAATTTATCACGATCCAGTAGCCGTACAGTTTTGCACAGGCGTACGGAGA 1111457 Query 48087 ACGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCTTACCATAAAGTTC 48146 || |||||||| ||||| | || ||||||| || || |||||| || ||||| || Sbjct 1111458 GCGCGGATAGAAGGGTGTCTTTTCATTCTGTGGCGTTTCCACCACCTTGCCGTAAAGCTC 1111517 Query 48147 ACTGGTGGATGCTTGATAGATACGAAC 48173 ||||| || ||||||| ||||| Sbjct 1111518 GGAAGTGGACGCCTGATAGAATCGAAC 1111544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665482995089720