Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20atroparvus_20[genbank_20GCA_5F000473505.1_202013-09-30] 1,371 sequences; 224,290,125 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq8 114 4e-20 >seq8 Length=9380469 Score = 114 bits (126), Expect = 4e-20 Identities = 178/252 (71%), Gaps = 2/252 (1%) Strand=Plus/Minus Query 302584 TTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGA 302643 ||||| | ||||||||| || ||||| ||| | || || || || ||||| || | | Sbjct 7675028 TTGATGAGACGACGCTGGATGTAACCGGTTTCGGCCGTCTTGACGGCGGTATCGATCAAA 7674969 Query 302644 CCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGT-AGCCCCCCAATAAA 302702 || | |||||||||||||| || ||| | | ||| ||| ||| ||||| | | | Sbjct 7674968 CCCTCGCGACCACCCATAGCGTGAAAGTAGAACTCGGTCGG-CGTCAGCCCGGCCAGGTA 7674910 Query 302703 GGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAG 302762 ||| | || ||||| ||||||| ||| || | |||| |||| | ||||| ||||| Sbjct 7674909 CGAGTTTTCGACGAACCCACGCGACTCAGGACCGTAGTCGTCCTTGATGAAGTGGGGCAG 7674850 Query 302763 GGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCA 302822 ||| | || | | ||| | || |||||||| || || |||||||| || |||| ||| Sbjct 7674849 GGTTCGCTTGCGAAACCCGAACGGAATACGCTTACCCTCGACGTTCTGTTGGCCCACGCA 7674790 Query 302823 CGAAATCATCTG 302834 | ||| | ||| Sbjct 7674789 AGCAATAACCTG 7674778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471791746144027