Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20atroparvus_20[genbank_20GCA_5F000473505.1_202013-09-30] 1,371 sequences; 224,290,125 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq8 158 8e-34 seq1 118 7e-22 seq2 89.7 3e-13 >seq8 Length=9380469 Score = 158 bits (174), Expect = 8e-34 Identities = 165/215 (77%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| ||||| || | ||| ||||||||||||||| ||||| || || ||||| |||| Sbjct 4936185 CAGCACCAGATGGAGGGTCGACTCCTTCTGAATGTTGTAGTCGGACAGCGTGCGCCCATC 4936126 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 ||||| ||||| |||||||||||||| || |||||||| |||| | ||||||||||| Sbjct 4936125 CTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGCGGAATGCCCTCCTTGTC 4936066 Query 34885 GTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATG 34942 | || || || || || || |||| || || |||||| |||| ||| ||| Sbjct 4936065 CTGGATCTTCGCCTTCAC--ATTCTCGATCGTATCCGAGGGCTCGACCTCAAGGGTAATG 4936008 Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| ||||||||||| || || ||||||||||| Sbjct 4936007 GTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 4935973 >seq1 Length=20238125 Score = 118 bits (130), Expect = 7e-22 Identities = 154/211 (73%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 |||||||| | || |||||||||||| || ||||| ||||| |||| |||| ||| Sbjct 19807233 ACCAGGTGGAGCGTAGACTCCTTCTGAATATTGTAGTCGGATAGCGTGCGGCCATCCTCC 19807174 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 | || || |||||||||||||| ||||| || ||| | || | |||||||| || | Sbjct 19807173 AACTGTTTGCCGGCGAAGATCAGACGTTGTTGATCTGGAGGAATTCCCTCCTTATCTTGG 19807114 Query 34889 ATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCT 34946 || || || || || || |||| || | |||||| |||| || ||||||| Sbjct 19807113 ATCTTGGCCTTCAC--ATTCTCGATCGTGTCCGACGGCTCGACCTCAAGCGTGATGGTCT 19807056 Query 34947 TTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || |||||||| || ||||| |||||||| Sbjct 19807055 TCCCAGTGAGGGTTTTCACAAAAATCTGCAT 19807025 >seq2 Length=16623535 Score = 89.7 bits (98), Expect = 3e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||||| |||| ||||||||| ||||| ||||| || || | || | || Sbjct 2043737 AGAACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCGTCC 2043678 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 ||||| ||||| || |||||||||| || ||||| ||| | || | ||||||||||| Sbjct 2043677 TCCAGCTGCTTACCAGCGAAGATCAAACGCTGCTGATCTGGGGGAATACCCTCCTTGTC 2043619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325687357978649