Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20atroparvus_20[genbank_20GCA_5F000473505.1_202013-09-30] 1,371 sequences; 224,290,125 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq3 118 2e-21 >seq3 Length=13649947 Score = 118 bits (130), Expect = 2e-21 Identities = 310/462 (67%), Gaps = 12/462 (3%) Strand=Plus/Minus Query 182866 GAACTATCGGATAATTTTTGTTACTATAATAAACATTACGATAGTGTTCAGTCTACTCAC 182925 || || ||||| || ||||| | ||| |||||| | ||||| | | | ||| || || Sbjct 8055240 GAGCTGTCGGACAACTTTTGCTTCTACAATAAAAACTACGACAATCTGCAGGGCGCTTAC 8055181 Query 182926 GCATGGGCTAGAAGAACATTAGAAGATCACGTTAATGATCCTAGAAAGTATAT--CTATT 182983 | ||||| | | ||| | || || ||| || || | || || || ||| | Sbjct 8055180 GATTGGGCGCGCAAAACGCTGGACGACCACCGAAAGGA--CAAGCGCGTCTACTGCTACT 8055123 Query 182984 CTATTAAACAACTCGAAAAGGCAGAAACACATGACCCTCTATGGAATGCATCACAAATAC 183043 | | | | || |||| |||| | || || ||| || ||||| | | || | | Sbjct 8055122 CCCGTGAGGAGCTGGAAACGGCAAAGACGCACGACGACCTGTGGAACTCGGCCCAGCTGC 8055063 Query 183044 AGATGATGAGAGAAGGAAAAATGCATAGTTTTTTACGAATGTACTGGGCTAAAAAGATAC 183103 ||||| ||| || || || ||||| |||| | || ||||||||||| || ||||||| Sbjct 8055062 AGATGGTGAAGGAGGGCAAGATGCACGGTTTCCTGCGCATGTACTGGGCGAAGAAGATAC 8055003 Query 183104 TTGAATGGACAAGAACTCCGGAAGATGC-TTTGAGTTATAG-TATCTATATGAACAATAA 183161 | || ||||| | |||||| || || || | ||| | | |||||| | ||| | Sbjct 8055002 TCGAGTGGACCAAAACTCCCGAGGAAGCGCTCGAG--ACGGCAATCTATCTCAACGACCG 8054945 Query 183162 GTACGAACTAGACGGTACG-GATCCTAACGGATACGTAGGTTGTATGTGGTCTATTTGCG 183220 |||| || || || ||| || || ||||||||||| ||||| |||||||| || || Sbjct 8054944 GTACAGCCTGGATGG-ACGCGACCCGAACGGATACGTCGGTTGCATGTGGTCGATCGCCG 8054886 Query 183221 GATTACACGAT-AGAGCGTGGAAAGAAAGACCTATATTTGGAAAGATAAGATATATGAAT 183279 | | |||||| || || ||||| || ||| || || || || |||||||| ||||| Sbjct 8054885 GCATTCACGATCAGGGC-TGGAAGGAGAGAGAAATCTTCGGTAAAATAAGATACATGAAC 8054827 Query 183280 TATGAGAGTTCTAAGAAGAAATTTGATGTTGCTACATTTATA 183321 || || | | |||| || ||| | ||| | ||||| || Sbjct 8054826 TACGAAGGATGTAAGCGAAAGTTTAACGTTAATGCATTTGTA 8054785 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903395717790560