Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20atroparvus_20[genbank_20GCA_5F000473505.1_202013-09-30] 1,371 sequences; 224,290,125 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq2 87.8 1e-12 seq8 84.2 1e-11 >seq2 Length=16623535 Score = 87.8 bits (96), Expect = 1e-12 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 ||||| || || ||| ||| || || |||||||| ||||| || || ||| |||| ||| Sbjct 2043734 ACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCGTCCTCC 2043675 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTC 33656 | || || || || || |||||||||||||||||| | || | ||| || ||||| Sbjct 2043674 AGCTGCTTACCAGCGAAGATCAAACGCTGCTGATCTGGGGGAATACCCTCCTTGTC 2043619 >seq8 Length=9380469 Score = 84.2 bits (92), Expect = 1e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | || || | ||||| ||| || || ||| || || |||||||| ||||| Sbjct 4936199 CCACCACGCAGGCGCAGCACCAGATGGAGGGTCGACTCCTTCTGAATGTTGTAGTCGGAC 4936140 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || |||| || || ||||| || |||| ||||||||| || |||| Sbjct 4936139 AGCGTGCGCCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGCGGA 4936080 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | || || ||||| || ||| |||| ||| || | || || | || || Sbjct 4936079 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCA-CATTCTCGATCGTATCCGAGGGCTCGAC 4936021 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| || || || ||||| || | ||||| || ||||||||||| Sbjct 4936020 CTCAAGGGTAATGGTCTTACCCGTGAGGGTTTTGACGAAGATCTGCAT 4935973 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328698507664320