Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20atroparvus_20[genbank_20GCA_5F000473505.1_202013-09-30] 1,371 sequences; 224,290,125 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq19 100 3e-16 >seq19 Length=3534686 Score = 100 bits (110), Expect = 3e-16 Identities = 495/774 (64%), Gaps = 17/774 (2%) Strand=Plus/Minus Query 136639 ACGGTGAATTGGATTGTATTCGCGGCAGGTTTAGTTCTCAGATAGTACATGCCCGTCTTT 136698 || || || ||||| | ||| | || || || || | ||| ||||||||||||||||| Sbjct 2154484 ACCGTAAACTGGATCGCGTTCACTGCCGGCTTGGTGCGCAGGTAGTACATGCCCGTCTTC 2154425 Query 136699 AAACCCTTCTCCCAGGAATAATTATGTATAGATGACAAAATTTTATAGCTCGGATCGGCC 136758 | ||| ||| |||| || ||| || || | || | ||| |||| |||||| Sbjct 2154424 AGGCCCATCTTCCAGCCGTAGAAATGAATCGACGTCAGCTTACCATAATTCGGCTCGGCC 2154365 Query 136759 ACGAAAAGATTTAGCGATTGGCTCTGATCGATGTAAGGTCCGCGGTCTGCGGCCATGTTC 136818 ||| || || | ||| || ||| || ||| | | || || || || ||||| || Sbjct 2154364 ACGTGAATGTTGAACGACTGCGACTGGTCAATGAACGCCCCACGATCGGCCGCCATTTTG 2154305 Query 136819 AATAGTACTTTTTG--CTTAATTTCCCAAGCGGTTTTAAAGAGCTCCTTGACATTGGGCG 136876 | || || |||| | |||||||||| | || || | | || || | ||| Sbjct 2154304 A-TAC-ACGTTTTCACCGAAATTTCCCAAACCGTCTTGTACAAGTCGCGGATGTGCTGCG 2154247 Query 136877 GAATTTCATCGATATTCTGTACAGATCCGTTGTTTTTGATGATTTTCATCATGAGATCAG 136936 ||||||| ||||| ||||| | || || |||| || ||| || | | | ||| Sbjct 2154246 GAATTTCCTCGATCTTCTGGATGGAACCATTGTGCGCGAGGATGTTGTTTTTCATTTCA- 2154188 Query 136937 TCGAGT-ATACGTTGCTCTCTATGAGTTTATCGACGAGATGCTGATTTACTACTTGATAT 136995 ||| | | | || | || | | | | ||| ||||| || || || | Sbjct 2154187 TCGTCCCACAGGCCTAAATCCGTCAGGTCCTGTAGCAAATGATGATTGACGACCTGGAAC 2154128 Query 136996 TCGCCCGATAGCACTCTGCGTACGTACAGATTACTAGTGAACGGCTCGAACGATTCGTTG 137055 |||||||| ||||| | || ||| | || |||| ||||||||||||| |||||| Sbjct 2154127 TCGCCCGACAGCACACGCCGATTGTAGACGTTCGAAGTGTACGGCTCGAACGACTCGTTG 2154068 Query 137056 TTACCCAAAATCTGTGCAGTCGTCGCTGTCGGCATGTAAGCGATCAACAATGAATTCCGT 137115 || ||||| ||||| || || | || |||||||| ||| | || | || || || Sbjct 2154067 TTGCCCAAGATCTGCGCGGTGGAAGCGGTCGGCATCGGAGCCAACAGAAGCGAGTTGCGA 2154008 Query 137116 AAACCGTGTACGGCCAATTGTTGCTTGAGCTCTTTCCAGTTCCACAGATTGTTCGATTGG 137175 | || || ||| | | || ||| ||| | |||||||||||| | | | | || Sbjct 2154007 ACGCCATGCTTGGCAATCTTTTCCTTCAGCACACCCCAGTTCCACAGCTCGGTGG---GG 2153951 Query 137176 GTTATATTCCACAAATCAAACTGCAAAAGTCCGCGACTTGCAGGACTTTCTGCATAAGAA 137235 || | ||||||| || |||||| | || || | ||||| | | || | Sbjct 2153950 GTCTTGTTCCACATGTCGTACTGCAGCATCCCCTTGCTGACCGGACTGCCCTCGTACGTC 2153891 Query 137236 TCATATGTTCCGTGCAGTTTCGCCAGTTCAATACTCTGGACT--AGTGCGCCATAGTAAA 137293 || || || || | | ||||| ||| | |||| || | ||||| ||||| | Sbjct 2153890 TCGTACGTGCCATCGCGGGCGGCCAGCTCACAA--CTGGCCTCCAAAGCGCCGTAGTAGA 2153833 Query 137294 TAGTTTCGGAGATTTTTCTATTCA-ATTCTCTAGCTTCTTGGCTGTCGTAGGGCATATC- 137351 | |||||| |||||| | |||| |||| || |||| || ||||| || || | Sbjct 2153832 TGGTTTCGAAGATTTGTTGGTTCAGCTTCT-GCGCCTCTTCACTCTCGTACGG-GTAGCG 2153775 Query 137352 CAATATAGCGAAAGCATCTGCAAGTCCTTGAATACCGATACCGATAGGTCTGTG 137405 || | | ||| ||||| || | || || | ||||||||||| || ||||| Sbjct 2153774 CATCAGAATGAACGCATCGGCCATGCCCTGCACGCCGATACCGATCGGCCTGTG 2153721 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445086772194720