Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20atroparvus_20[genbank_20GCA_5F000473505.1_202013-09-30] 1,371 sequences; 224,290,125 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq10 125 1e-23 >seq10 Length=7496699 Score = 125 bits (138), Expect = 1e-23 Identities = 346/524 (66%), Gaps = 10/524 (2%) Strand=Plus/Minus Query 161174 GAGATCTACAACCTAGGGGCACAGAGTCATGTGAAAGTATCTTTCGAGGAACCTGAATAT 161233 || ||||||||| | | || ||||| ||||||||| | || ||||| | |||||| Sbjct 1111676 GAAATCTACAACTTGGCCGCCCAGAGCCATGTGAAAATCTCCTTCGATTTAAGCGAATAT 1111617 Query 161234 ACAGCACAGACTGATGCTCTGGGAACCCTAAGAGTATTGGAGGCAGTTCGTCTCCTAGGT 161293 || || | || || ||||||| || | | | || || | ||| | | || Sbjct 1111616 ACGGCCGAAGTGGACGCAGTGGGAACGCTTCGTCTCCTCGACGCCATCCGTACCGTGGGG 1111557 Query 161294 ATGACAGATAGG--GTCCGTATCTACCAGGCATCCACCAGTGAGTTGTATGGGTTGGTAC 161351 || ||| ||| || || |||| ||||| ||||| ||| | || || ||| Sbjct 1111556 CTGG-AGA-AGGCTGTTCGATTCTATCAGGCGTCCACTTCCGAGCTTTACGGCAAGGTGG 1111499 Query 161352 AAGAGACACCACAGAAAGAAACAACACCTTTCTACCCACGATCTCCATATGGCGTAGCTA 161411 || || |||||||| |||| ||||| ||||| || || ||||| || | | || | Sbjct 1111498 TGGAAACGCCACAGAATGAAAAGACACCCTTCTATCCGCGCTCTCCGTACGCCTGTGCAA 1111439 Query 161412 AACTCTATGGATATTGGATTGTAAAGAACTACAGAGAGAGTTATGGGATGCACGCCAGTA 161471 |||| || || || ||||| || | || ||| | || || | ||| ||| | | Sbjct 1111438 AACTGTACGGCTACTGGATCGTGATAAATTACCGCGAAGCGTACGACATGTTTGCCTGCA 1111379 Query 161472 GTGGTATTCTATTCAACCATGAGTCACCACGACGGGGTGAGACTTTCGTAACCCGTAAGA 161531 ||| || || |||||||||||||| || || ||||| || | ||| || ||||| |||| Sbjct 1111378 ATGGCATCCTGTTCAACCATGAGTCTCCCCGCCGGGGAGAAAATTTTGTCACCCGCAAGA 1111319 Query 161532 TTACTAGGGGACTATCCCGTA---TTAGTACAGGACTACAGGATTGTCTATACCTAGGTA 161588 | || | | | | | | || | | || | |||||| || | | || || | Sbjct 1111318 TAAC--GCGCTCGGTGGCAAAAATTTCGCTC-GGTCAACAGGAGTGCTTGGAGCTGGGCA 1111262 Query 161589 ATCTAAACTCAAGACGAGATTGGGGTCATGCTGAAGACTATGTGGAGGCTATGTGGTTGA 161648 |||| |||| | || || ||||| || || | ||||| || ||||| |||||| ||| Sbjct 1111261 ATCTCGACTCGAAGCGTGACTGGGGCCACGCGCAGGACTACGTCGAGGCCATGTGGCTGA 1111202 Query 161649 TGTTACAACAGGAAACTCCTGATGACTATGTGATTGCCACAGGT 161692 || | || ||||| | || || || | ||| || ||||| ||| Sbjct 1111201 TGATGCAGCAGGAGAAACCGGAAGATTTTGTCATCGCCACCGGT 1111158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 729917090831480