Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20atroparvus_20[genbank_20GCA_5F000473505.1_202013-09-30] 1,371 sequences; 224,290,125 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq19 253 3e-62 seq10 109 8e-19 >seq19 Length=3534686 Score = 253 bits (280), Expect = 3e-62 Identities = 1161/1818 (64%), Gaps = 30/1818 (2%) Strand=Plus/Minus Query 68394 TGCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAA 68453 ||| || || || || || |||||||| || || ||||| || | |||| |||||||| Sbjct 2154461 TGCCGGCTTGGTGCGCAGGTAGTACATGCCCGTCTTCAGGCCCATCTTCCAGCCGTAGAA 2154402 Query 68454 ATGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATATTCATCGATTGACT 68513 ||| || || || || |||| | || ||||| | ||||| || | ||| || Sbjct 2154401 ATGAATCGACGTCAGCTTACCATAATTCGGCTCGGCCACGTGAATGTTGAACGACTGCGA 2154342 Query 68514 TTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTTTTGA--GGAATT 68571 || || ||||| || || | ||| ||||||||||| ||| || |||| | | |||| Sbjct 2154341 CTGGTCAATGAACGCCCCACGATCGGCCGCCATTTTGATAC-ACG-TTTTCACCGAAATT 2154284 Query 68572 TCCCAAATAGTCTTAAAAATCTGTTTGATATCATCTGGAA--GGCTCG-TATTTTGAATG 68628 ||||||| ||||| | | | ||| | | |||| |||| | || || ||| Sbjct 2154283 TCCCAAACCGTCTTGTACAAGTCGCGGATGTGCTGCGGAATTTCCTCGATCTTCTGGATG 2154224 Query 68629 GATCCACCATCGGATATAATTATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTT 68688 || ||| | | | || | || || || ||||| | ||||| | ||||| Sbjct 2154223 GAACCATTGTGCGCGAGGATGTTGTTTTTCATTTCATCGTCCCACAGGCCTAAATCCGTC 2154164 Query 68689 AAAACTCTAAGGAGATGCGGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTG 68748 | | || | ||| |||| || | || || || || || | ||| | ||| || Sbjct 2154163 AGGTCCTGTAGCAAATGATGATTGACGACCTGGAACTCGCCCGACAGCACACGCCGATTG 2154104 Query 68749 TAAATATTACTGGTATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGAT 68808 || | || || || || || | || || || || |||| || || || || || Sbjct 2154103 TAGACGTTCGAAGTGTACGGCTCGAACGACTCGTTGTTGCCCAAGATCTGCGCGGTGGAA 2154044 Query 68809 GCAGTTGGCATAGGTGCCACCAATAAACTA-TTTCTAAGACCATGTGTTATGATTTTATC 68867 || || ||||| || |||| | | || | | || | || ||||| | || || || Sbjct 2154043 GCGGTCGGCATCGGAGCCAAC-AGAAGCGAGTTGCGAACGCCATGCTTGGCAATCTTTTC 2153985 Query 68868 TTTTAGATGTTTCCAATCCCAAAGATCAGATGGTACAACATTCCAAAGATCGTATTGTAG 68927 || || ||| | ||| || || | || ||||| | ||||| || || Sbjct 2153984 CTTCAGCACACCCCAGTTCCACAGCTCGGTGGGGGTCTTGTTCCACATGTCGTACTGCAG 2153925 Query 68928 AATTCCGTTACTTGCATATGATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAG 68987 || || || || | || | || || || || | || || | | || || Sbjct 2153924 CATCCCCTTGCTGACCGGACTGCCCTCGTACGTCTCGTACGTGCCATCGCGGGCGGCCAG 2153865 Query 68988 TTCACAACTTGCCTCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATC 69047 |||||||| ||||| || || ||||| || || |||||||| || | | || || | Sbjct 2153864 CTCACAACTGGCCTCCAAAGCGCCGTAGTAGATGGTTTCGAAGATTTGTTGGTTCAGCTT 2153805 Query 69048 TTGTGCTTCTAGACTATCGAATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTG 69107 || || ||| ||| ||| | || || | | ||||| || ||||| |||| ||||| Sbjct 2153804 CTGCGCCTCTTCACTCTCGTACGGGTAGCGCATCAGAATGAACGCATCGGCCATGCCCTG 2153745 Query 69108 AACCCCAATACCGATAGGTCTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATA 69167 || || |||||||| || || || | | | || || | | ||||| || | || || Sbjct 2153744 CACGCCGATACCGATCGGCCTGTGGCGCATGTTGGAGCGCTTCGCTTCCGGCACCGGGTA 2153685 Query 69168 ATAATTAATATCTATAATTTTATTAAGATTTCGGACTACTACTTTAACCACGTCCTTTAG 69227 || ||||| || || ||||| || || || || || || | || ||||| || Sbjct 2153684 GTAGTTAATGTCGATGATTTTGTTCAGGTTGCGCGTGACAGTCTTGGCGACTTCCTTCAG 2153625 Query 69228 TTTGAGAAAATCAAA----TCGTCCATCTATAACAAACATATTCAGTGCTACAGATGCTA 69283 ||| |||||| | | |||| || | || ||||| ||||| || | ||||| | Sbjct 2153624 TTTCGCAAAATCGTACGTGTGGTCCGGCT-TCACGAACATGTTCAGCGCGATTGATGCCA 2153566 Query 69284 GATTACAAACTGCTACCTCAT--TAGAATTTGCATATTGTATTATCTCTGTACATAGATT 69341 |||| || || |||| |||| | | | | || | | || || || || || || Sbjct 2153565 GATTGCAGACCGCTATTTCATCCTTGGA--CGAGTACTCGACGATTTCCGTGCACAGGTT 2153508 Query 69342 ACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTA 69401 || ||||| || |||| || || || || ||||| || || || |||||||| Sbjct 2153507 TGAGCACTTGATTGTGCCCACGTTCTGTTGGTTGCTCTTGCGATTGCACGCATCCTTGTA 2153448 Query 69402 AAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCT 69461 || || |||| || || || | ||| |||||||| || | ||| | || ||| Sbjct 2153447 CAGCATGTACGGGACGCCCGTCTCGACCTGCGATTCGATGATGGCAAACCACA-GATCCT 2153389 Query 69462 -AGCATTTA--TTACGGTCTTGTAACGCTTCTCTTTTTCATATTGTGTATATAGCCGTTC 69518 ||| || | | |||| | | || ||| || || || ||| || ||| ||| Sbjct 2153388 GAGCCTTGACCTGACGG--ATAAACCGGCCCTCCTTCTCGTAGCCTGTGTAGAGCTTTTC 2153331 Query 69519 GAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCA 69578 || || |||||||| ||| || ||| ||||| || | || |||||||| ||| Sbjct 2153330 AAACTCCTCTCCCCACGAATCCGACAGTCCGGGACAATCGTGCGGGCACATCAAGCTCCA 2153271 Query 69579 CACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAG 69638 || || | ||| || || | ||| || ||||| || | ||| || || || | Sbjct 2153270 CATCTCGTTCGCCTCGACGCGCTGCATGAACAGATCCGGCACCCAGAGGGCGTAGAACAT 2153211 Query 69639 ATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAAT 69698 || | | | || || || || || || || || |||||||||||||| | | Sbjct 2153210 GTCGCGCGCGCGGACCTCCTCCTTGCCGGTGTTCTTCTTCAGATCGAGAAACTCGAACAC 2153151 Query 69699 ATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTG 69758 ||| ||||| || || || || ||||| | | || || || || || || ||||| Sbjct 2153150 ATCGCCGTGCCACGGCTCGAGGTAGATCGCGAACGCACCGGGGCGCTTGTTGCCGCCCTG 2153091 Query 69759 ATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTT 69818 || | || | || ||||| || ||||| | ||||||||| | | || || || | Sbjct 2153090 GTCGACATAGCGCGCGGTGTTGTTGTAGACGCGCAGCATCGGCACCAGCCCGTTGGAAAT 2153031 Query 69819 ACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAAT--ATTACTAATAGATAGACCT 69876 || || || || | || || |||| | || || || | | || | || || Sbjct 2153030 TCCGTTCGTGCCTGCGATGTACGTTCCCTTCGCACGGATGCAGTGGACATTCA-AG-CCA 2152973 Query 69877 ATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCT 69936 || ||||| ||| || || || || || || | ||||| ||||| || || ||||| Sbjct 2152972 ATGCCTCCGGCCGACTTCGAAATCAGCGCGCACTGCTTCAACGTGTCGTAAATGCCCTCG 2152913 Query 69937 ATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCC 69996 ||||| || || ||| | || ||||| ||| ||| | || || || || | Sbjct 2152912 ATGCTGTCGTCCGACATCGTCAGCAGAAAGCAGGAAGAAAGCTGCGGACGTTGTGTCGCA 2152853 Query 69997 GCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTT 70056 || ||| |||||||| || || || || || | || || || ||||| || || Sbjct 2152852 GCCGCAAACAATGTAGGCGACGCATGCGTAAAGTAACGCTCCGAGAGTAGATTATAGGTC 2152793 Query 70057 TCAATAGCTGATTCTATATCC-CACTGATGAATTCCTATCGCGACACGCATCAACATATG 70115 || || || | || |||||| | | | ||||| || || || || ||||||| |||||| Sbjct 2152792 TCTATGGCCGCATCGATATCCTCGCCG-TGAATGCCGATGGCTACGCGCATCAGCATATG 2152734 Query 70116 CTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTT 70175 ||| ||||| || || | || || || |||| |||||| || |||||| ||||| Sbjct 2152733 CTGCGGTCGCTCAACGATCTTGCCCTTGATCTTCAGCAGGTACGACCGTTCCAGCGTTTT 2152674 Query 70176 AAACCCAAAATAGTTGTA 70193 || |||||||| ||||| Sbjct 2152673 GAAGCCAAAATAATTGTA 2152656 >seq10 Length=7496699 Score = 109 bits (120), Expect = 8e-19 Identities = 182/259 (70%), Gaps = 7/259 (3%) Strand=Plus/Plus Query 39605 TTAAACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTA 39664 || ||||| | ||||| ||||| || || |||||||| || | ||| | ||||| Sbjct 495513 TTGAACATCAGACAGGCAAAGTCGCAGTGCAGGCCCTCGTCGCGCGAAATCAGCTCGTTC 495572 Query 39665 GAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGAT 39724 || || || | || ||||| || || ||||| || ||||| || ||||| || || | | Sbjct 495573 GAGAAGGTCAAACCCGGCATCAGGCCCCGCTTCTTCAGCCAGAAAATGGCGGCGAA-GCT 495631 Query 39725 CCAGA-AAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTG- 39782 || | |||||||||||| || || || ||||| ||||| | | ||| || || ||| Sbjct 495632 CCCGCTAAAGAAGATGCCCTCGACGGCGGCAAACGCAACCACCCGCTCGCC-AAAGTTGG 495690 Query 39783 ---TATCATTATGTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTG 39839 | | | ||||| ||| | ||||| || || |||||||| || || |||| || Sbjct 495691 CCTTCTTGCTCGAGATCCAGTTCAGCGCCCAGTCGGCCTTCTTCTTCACGCACGGCAGTG 495750 Query 39840 TTTCTATAGCATTAAAGAG 39858 |||| || ||||| || || Sbjct 495751 TTTCGATGGCATTGAATAG 495769 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686897028100440