Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20atroparvus_20[genbank_20GCA_5F000473505.1_202013-09-30] 1,371 sequences; 224,290,125 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq83 125 6e-24 >seq83 Length=112245 Score = 125 bits (138), Expect = 6e-24 Identities = 185/261 (71%), Gaps = 6/261 (2%) Strand=Plus/Minus Query 19269 TGAAATCTTTCGTAGAGCATTTGTGTCGCGTGTTTTTTCTGCAGATGTCATTAAACAATT 19328 || |||||||||| | || |||| || ||||| ||| | | || || || ||||| | Sbjct 80105 TGCAATCTTTCGTCGTGCTTTTGCCTCTCGTGTCTTTCCGCCTGAAGTAGTTGAACAACT 80046 Query 19329 GGGATGTAAACATGTTCGTGGACTTTTGCTTTATGGGCCACCGGGTTGTGGAAAAACATT 19388 || || || ||||| ||| ||||||| ||||| || || ||| ||||||||||| Sbjct 80045 AGGTTGCAAGCATGTGAAAGGAATTTTGCTGTATGGACCTCCCGGTACCGGAAAAACATT 79986 Query 19389 AATTGCGAGAGAACTTAGTAAA---TTACTTACAAAACAACCTCCCAAAATTGTAAATGG 19445 || || | | || ||| | || | ||| | || || |||||||| ||||| Sbjct 79985 GATGGCACGTCAGATTGGTACAATGTTGAATGCAAGAGAA---CCGAAAATTGTTAATGG 79929 Query 19446 TCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAATGTACGACGTTTGTTTGC 19505 ||| | || || |||| |||||||| |||| |||| |||||||| | || ||||| Sbjct 79928 TCCCCAGATTTTGGATAAGTATGTAGGAGAATCAGAAGCTAATGTACGCAGATTATTTGC 79869 Query 19506 TGACGCTGAAGAAGAACAAAA 19526 ||| |||||||| ||| |||| Sbjct 79868 TGATGCTGAAGAGGAAGAAAA 79848 Score = 104 bits (114), Expect = 2e-17 Identities = 186/269 (69%), Gaps = 6/269 (2%) Strand=Plus/Minus Query 19549 TTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTTC--TGGT- 19605 |||||||| || || | |||||| | ||||| || ||||| | | || | ||| Sbjct 79755 TTGCACATCATTATTTTCGATGAAATAGACGCCATTTGTAAAGCACGGGGAACAGTGGGA 79696 Query 19606 -GTAAAT--GGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGTT 19662 |||| | || || ||||| |||||||| |||||| | || | ||| | || || || Sbjct 79695 GGTAATTCAGGTGTTCATGATACTGTTGTAAATCAATTGTTGGCCAAAATCGATGGCGTA 79636 Query 19663 AACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGACAGC 19722 | ||| | ||||||||||| || || || |||||||| |||| || | || ||| Sbjct 79635 GAGCAATTAAATAATATTTTGGTAATCGGTATGACTAACAGACGAGATATGATTGACGAA 79576 Query 19723 GCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATGAATGT 19782 || || | ||||| || || ||||| | |||| ||||| | | ||||| ||||| Sbjct 79575 GCATTGATGCGACCGGGCAGGCTGGAAGTTCAGATGGAAATCAGCCTACCCAATGAAGAA 79516 Query 19783 GGACGTGTGGAAATTTTAAACATACATAC 19811 || ||||| ||||| | ||| ||||| Sbjct 79515 GGTCGTGTACAAATTCTTCGCATTCATAC 79487 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397449358882855