Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20atroparvus_20[genbank_20GCA_5F000473505.1_202013-09-30] 1,371 sequences; 224,290,125 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq19 129 2e-24 >seq19 Length=3534686 Score = 129 bits (142), Expect = 2e-24 Identities = 213/297 (72%), Gaps = 8/297 (3%) Strand=Plus/Plus Query 254981 CCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAACGC 255040 || ||| | || || | ||||||| || ||||| ||||| || || ||| ||| ||| Sbjct 2153049 CCGATGCTGCGCGTCTACAACAACACCGCGCGCTATGTCGACCAGGGCGGCAACAAGCGC 2153108 Query 255041 CCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGACATTGAACG-GTTTTTACT 255099 || || |||||| | |||||||| ||||||||||||| ||| || || |||| | Sbjct 2153109 CCCGGTGCGTTCGCGATCTACCTCGAGCCGTGGCACGGCGA-TGTGTTCGAGTTTCTCGA 2153167 Query 255100 GCTGTCCGACAAGACCGGCACCGAGGAGCTGATCGCCCGCGACATCTACACCGCTGTCT- 255158 ||| | || ||||||| |||||| | ||| |||||||| | | ||| ||| Sbjct 2153168 TCTGAAGAAGAACACCGGCAAGGAGGAGGTCCGCGCGCGCGACATGTTCTACGCCCTCTG 2153227 Query 255159 GGTGCTGCGATCTGTTTATGCGACGCGTGGA-ACGAGACGAGACCTGGAGCCTCATGTGT 255217 ||||| | |||||||| |||| ||||| || ||| |||||| |||||| | ||||| Sbjct 2153228 GGTGCCG-GATCTGTTCATGCAGCGCGTCGAGGCGA-ACGAGATGTGGAGCTTGATGTGC 2153285 Query 255218 CCCAACTTATCGCCCGGTCTAGTC-GACTCTTGGGGTGACGAGTTTGAAAAACTGTA 255273 || || | ||||| || ||| || || ||||| || ||||||||||| || || Sbjct 2153286 CCGCACGATTGTCCCGGACT-GTCGGATTCGTGGGGAGAGGAGTTTGAAAAGCTCTA 2153341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588308099389095