Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20atroparvus_20[genbank_20GCA_5F000473505.1_202013-09-30] 1,371 sequences; 224,290,125 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq28 91.5 1e-13 >seq28 Length=1484777 Score = 91.5 bits (100), Expect = 1e-13 Identities = 224/337 (66%), Gaps = 2/337 (1%) Strand=Plus/Plus Query 6616 GACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAA 6675 ||| || || ||||||| || |||| | ||| || ||||| ||||| || || || || Sbjct 598042 GACGTGGGCAATCATGTGTGTCAGCAAGGAGTAGCTTGCAATATTGAAAGGGACACCCAA 598101 Query 6676 CCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAA 6735 |||| ||| | || ||||| || | ||| ||||||||||| || | || || | || Sbjct 598102 ACCCACGTCGGCTGACCGTTGGTACATCTGACAGGACAGCTCGCCGTCAGCAACAAAAAA 598161 Query 6736 TTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGC 6795 ||| | ||||| ||||| |||||||| || | || |||| ||||| || Sbjct 598162 CTGGGCCAAACAATGGCAAGGGGGTAGCGCCATGTTCGGAATGTCGCTCGGATTCCAGGC 598221 Query 6796 GCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACGTACTGCAG 6855 |||| | |||||| | |||| || || ||| | | |||||||| | ||| Sbjct 598222 AGACATAATGATCCTACGATCATATGGATTGTTCTTTATCTTATCGATCACTTCAGCCAG 598281 Query 6856 CTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGC-TCCCCCGATACTCCGCCCCAAAGT 6914 || || || | |||| || || | | || | |||| |||| || ||||||| Sbjct 598282 TTGATCTTTGCCTTTTCCCTTGTAATCATCGTGGCATGTCCCG-TACTTGGCACCAAAGT 598340 Query 6915 GTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCC 6951 | | ||| || || ||||| || || || || || || Sbjct 598341 GGCGCCATTGAAAGCCGTATACTGGCCCTAAATCACC 598377 Score = 91.5 bits (100), Expect = 1e-13 Identities = 224/337 (66%), Gaps = 2/337 (1%) Strand=Plus/Minus Query 34394 GGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCGGGGG 34453 || || || || || || ||||| || || ||| | |||||||| || |||| |||| Sbjct 598377 GGTGATTTAGGGCCAGTATACGGCTTTCAATGGCGCCACTTTGGTGCCAAGTA-CGGGAC 598319 Query 34454 A-GCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCGACACCTT 34512 | || | | || || |||| | || || || ||| | |||||||| | | Sbjct 598318 ATGCCACGATGATTACAAGGGAAAAGGCAAAGATCAACTGGCTGAAGTGATCGATAAGAT 598259 Query 34513 GAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCC 34572 ||| || || |||| | |||||| | |||| || ||||| |||| || | || Sbjct 598258 AAAGAACAATCCATATGATCGTAGGATCATTATGTCTGCCTGGAATCCGAGCGACATTCC 598199 Query 34573 TCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCT 34632 |||||||| ||||| ||||| | ||| || | || || | || ||||| Sbjct 598198 GAACATGGCGCTACCCCCTTGCCATTGTTTGGCCCAGTTTTTTGTTGCTGACGGCGAGCT 598139 Query 34633 GTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGC 34692 |||||| ||| | || ||||| || | ||| |||| || || || || ||||| ||||| Sbjct 598138 GTCCTGTCAGATGTACCAACGGTCAGCCGACGTGGGTTTGGGTGTCCCTTTCAATATTGC 598079 Query 34693 TAGTTACGCTCTGCTCACGTACATGATCGCTCATGTC 34729 || ||| | |||| || ||||||| || || ||| Sbjct 598078 AAGCTACTCCTTGCTGACACACATGATTGCCCACGTC 598042 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448254717903120